Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 3.9e-254 880.9 431 100.0
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.7e-223 778.5 443 88.0
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 2.7e-199 698.7 436 79.6
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 7.2e-160 567.8 432 66.4
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 9.5e-152 540.8 426 61.0
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 4.7e-151 538.5 417 63.3
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.4e-150 537.0 415 61.0
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.4e-150 537.0 425 59.5
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.0e-149 533.1 422 60.7
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 2.0e-149 533.1 421 61.3
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 3.7e-148 528.9 427 58.5
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.1e-147 527.3 417 61.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 9.2e-147 524.2 425 59.1
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 3.5e-146 522.3 422 59.7
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 6.0e-146 521.5 431 60.6
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.0e-145 520.8 417 60.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.3e-145 520.4 414 60.9
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.7e-145 520.0 430 58.6
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 3.0e-145 519.2 414 60.4
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.1e-144 517.3 420 59.3
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 7.3e-144 514.6 424 60.1
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 9.5e-144 514.2 426 60.3
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.2e-143 513.8 426 58.5
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.1e-143 513.1 424 59.9
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 8.0e-143 511.1 415 61.4
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 8.0e-143 511.1 415 59.8
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 1.1e-142 510.8 427 60.2
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 1.1e-142 510.8 427 60.2
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 1.1e-142 510.8 427 60.2
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 1.1e-142 510.8 418 59.6
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.4e-142 510.4 431 59.4
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.8e-142 510.0 422 58.5
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 3.1e-142 509.2 427 58.8
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 5.2e-142 508.4 417 59.2
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.2e-141 507.3 416 58.2
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.5e-141 506.9 421 59.6
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.5e-141 506.9 422 60.0
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.5e-141 506.9 422 60.0
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.5e-141 506.9 422 60.0
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.5e-141 506.9 357 64.7
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 5.8e-141 505.0 412 60.4
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 9.8e-141 504.2 427 59.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.3e-140 503.8 421 59.9
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 1.3e-140 503.8 427 60.0
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.7e-140 503.4 421 59.9
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 2.2e-140 503.1 421 59.6
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 2.2e-140 503.1 429 59.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 2.2e-140 503.1 415 58.1
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 2.9e-140 502.7 424 58.3
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 3.7e-140 502.3 433 56.8
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.9e-140 501.9 427 56.7
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 6.4e-140 501.5 414 58.2
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 6.4e-140 501.5 436 57.1
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 8.3e-140 501.1 426 58.5
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.1e-139 500.7 346 65.9
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 1.4e-139 500.4 434 58.5
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.4e-139 500.4 413 59.1
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.9e-139 500.0 416 57.9
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.9e-139 500.0 424 57.3
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.2e-139 499.2 390 59.7
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.2e-139 499.2 353 64.0
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 3.2e-139 499.2 431 57.1
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 3.2e-139 499.2 423 57.9
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 4.1e-139 498.8 410 58.8
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.1e-139 498.8 421 57.0
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 5.4e-139 498.4 411 57.7
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 9.2e-139 497.7 383 61.1
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.2e-138 497.3 413 59.8
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 2.1e-138 496.5 409 58.4
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 3.5e-138 495.7 420 57.9
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 3.5e-138 495.7 420 57.9
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 3.5e-138 495.7 422 58.5
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 6.0e-138 495.0 412 56.1
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 7.8e-138 494.6 432 58.1
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.0e-137 494.2 426 55.9
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.3e-137 493.8 416 57.9
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 3.0e-137 492.7 415 58.3
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-137 492.7 436 56.4
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 3.9e-137 492.3 414 57.5
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.1e-136 490.7 414 56.0
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.5e-136 490.3 422 56.6
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 1.9e-136 490.0 415 56.9
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 1.9e-136 490.0 415 57.6
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 2.5e-136 489.6 348 62.6
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.6e-136 488.4 414 55.8
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 7.3e-136 488.0 416 56.2
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 7.3e-136 488.0 408 59.8
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.2e-135 487.3 416 56.2
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.4e-134 483.8 443 54.2
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 5.2e-134 481.9 342 63.7
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 2.6e-133 479.6 417 55.2
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 3.4e-133 479.2 419 57.0
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.5e-133 478.0 417 55.9
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.5e-133 478.0 414 55.1
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 9.9e-133 477.6 412 56.8
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 1.3e-132 477.2 376 63.0
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.2e-132 476.5 354 60.7
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 2.9e-132 476.1 352 61.9
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 3.7e-132 475.7 346 61.6
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 6.4e-132 474.9 425 54.6
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 8.3e-132 474.6 411 56.0
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.2e-130 470.7 414 56.3
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.6e-130 470.3 346 62.1
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 3.5e-130 469.2 350 62.3
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 6.6e-129 464.9 420 55.0
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 2.5e-128 463.0 416 54.6
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 4.3e-128 462.2 416 55.0
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 4.3e-128 462.2 410 55.4
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 5.6e-128 461.8 416 55.0
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 9.5e-128 461.1 445 52.4
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 3.6e-127 459.1 420 54.8
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 4.7e-127 458.8 346 59.5
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 5.2e-126 455.3 419 53.2
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-125 453.8 432 54.4
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 7.6e-125 451.4 347 59.7
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-124 450.7 426 53.5
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 2.9e-124 449.5 437 53.1
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.1e-123 447.6 333 61.3
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 3.2e-123 446.0 347 61.1
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 9.2e-123 444.5 433 53.6
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-121 441.0 426 52.1
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.3e-121 440.7 423 54.4
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-121 439.5 430 52.6
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 1.9e-120 436.8 418 53.6
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-120 436.0 433 50.8
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 5.6e-120 435.3 426 51.6
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.8e-119 433.0 417 51.3
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 4.8e-119 432.2 360 57.2
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-118 431.0 341 57.2
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-118 430.3 419 53.2
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 5.8e-117 425.2 356 56.5
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 7.6e-117 424.9 444 50.9
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.2e-116 423.3 434 48.6
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.9e-115 420.2 347 57.1
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.1e-112 411.0 375 51.5
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.3e-111 407.5 375 51.2
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 2.4e-110 403.3 288 63.9
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 3.1e-110 402.9 449 49.9
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.0e-109 400.2 383 52.0
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.1e-99 367.9 347 49.9
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 3.5e-98 362.8 250 65.6
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.3e-97 360.1 417 47.2
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.3e-97 360.1 253 64.8
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 3.9e-97 359.4 347 48.4
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 8.7e-97 358.2 362 47.5
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-96 357.8 410 43.2
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.9e-96 357.1 303 55.4
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 6.2e-95 352.1 353 46.7
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.2e-91 339.3 390 44.1
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.2e-90 337.8 239 63.6
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.8e-89 334.0 340 45.9
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 2.3e-89 333.6 362 45.9
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.1e-88 331.3 359 46.2
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 5.7e-88 328.9 341 46.9
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 7.4e-88 328.6 355 45.4
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 1.3e-87 327.8 241 63.5
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 2.5e-83 313.5 289 57.1
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 6.7e-81 305.4 400 42.5
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 8.8e-81 305.1 237 56.5
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 3.1e-78 296.6 237 56.1
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.4e-73 281.2 299 44.8
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.8e-73 280.8 347 41.2
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.9e-73 279.6 343 40.8
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.6e-72 276.9 364 37.9
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.7e-72 275.8 349 39.8
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.7e-71 273.1 341 41.1
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.7e-71 273.1 346 38.2
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-64 251.5 243 46.9
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.8e-60 236.5 347 35.2
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 4.7e-58 229.6 380 35.3
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.8e-38 164.5 152 55.3
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 9.2e-38 162.2 154 52.6
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 1.8e-33 147.9 417 25.9
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 7.8e-21 105.9 100 48.0
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.6e-20 102.4 128 38.3
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 3.7e-15 87.0 85 42.4
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.9e-14 84.7 86 44.2
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.4e-14 84.3 116 49.1
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 8.6e-12 75.9 79 38.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.3e-11 73.9 87 42.5
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 3.8e-07 60.5 47 63.8
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.1e-06 58.9 65 38.5


User provided reference genes

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