Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 5.3e-84 314.3 159 100.0
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.7e-69 266.2 187 77.0
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 2.0e-67 259.2 159 85.5
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 6.3e-53 211.1 154 64.9
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 8.3e-53 210.7 155 65.8
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 3.2e-52 208.8 157 65.6
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.6e-51 206.5 152 65.1
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.6e-51 206.5 151 64.2
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.3e-50 203.4 157 61.1
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 1.3e-50 203.4 159 64.2
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.9e-50 202.2 149 66.4
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 6.6e-50 201.1 149 67.1
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 2.5e-49 199.1 158 62.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 5.6e-49 198.0 153 62.1
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 2.1e-48 196.1 149 65.1
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 3.6e-48 195.3 150 62.7
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 4.7e-48 194.9 152 59.9
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 1.0e-47 193.7 151 62.9
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.4e-47 193.4 154 59.7
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 1.8e-47 193.0 151 60.9
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 2.3e-47 192.6 154 58.4
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 4.0e-47 191.8 150 64.7
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 8.9e-47 190.7 150 63.3
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 8.9e-47 190.7 153 58.2
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 1.2e-46 190.3 154 60.4
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.2e-46 190.3 153 58.2
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.5e-46 189.9 133 71.4
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 2.0e-46 189.5 150 62.7
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 2.6e-46 189.1 153 60.1
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 2.6e-46 189.1 145 60.7
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 3.4e-46 188.7 153 58.2
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 3.4e-46 188.7 152 59.9
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 5.8e-46 188.0 151 63.6
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 7.5e-46 187.6 151 58.9
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 7.5e-46 187.6 162 56.8
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 9.8e-46 187.2 153 62.1
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 1.7e-45 186.4 150 60.7
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 2.2e-45 186.0 150 57.3
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 2.9e-45 185.7 157 57.3
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 2.9e-45 185.7 153 56.9
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 4.9e-45 184.9 157 56.7
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 4.9e-45 184.9 148 58.8
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 6.4e-45 184.5 151 60.3
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 8.3e-45 184.1 154 57.8
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.1e-44 183.7 168 56.5
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.4e-44 183.3 150 57.3
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.4e-44 183.3 148 59.5
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 3.2e-44 182.2 127 68.5
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 5.4e-44 181.4 152 55.3
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 5.4e-44 181.4 151 57.6
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 7.0e-44 181.0 150 58.0
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.2e-43 180.3 153 56.2
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.6e-43 179.9 154 55.8
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.6e-43 179.9 154 55.8
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.6e-43 179.9 154 55.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.6e-43 179.9 123 67.5
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 3.5e-43 178.7 157 54.8
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 4.6e-43 178.3 123 70.7
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 4.6e-43 178.3 146 61.6
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 7.8e-43 177.6 147 60.5
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.7e-42 176.4 130 65.4
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 3.9e-42 175.3 154 57.1
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 5.0e-42 174.9 150 55.3
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 8.6e-42 174.1 128 66.4
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 8.6e-42 174.1 150 57.3
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.5e-41 173.3 152 56.6
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.5e-41 173.3 145 57.2
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 1.5e-41 173.3 150 53.3
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 4.3e-41 171.8 148 57.4
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 5.6e-41 171.4 149 57.0
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.6e-40 169.9 148 57.4
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 1.6e-40 169.9 123 67.5
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 2.1e-40 169.5 150 54.0
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 2.8e-40 169.1 121 66.9
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 2.8e-40 169.1 182 51.1
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 6.2e-40 167.9 154 54.5
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.1e-39 167.2 148 55.4
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.8e-39 166.4 124 62.9
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 2.3e-39 166.0 149 54.4
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 2.3e-39 166.0 156 53.8
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 5.2e-39 164.9 180 48.3
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.2e-38 163.7 128 63.3
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 1.5e-38 163.3 154 52.6
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 2.0e-38 162.9 189 48.1
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 2.9e-37 159.1 151 49.7
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 1.9e-36 156.4 145 53.1
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 1.9e-36 156.4 145 53.1
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.9e-36 156.4 122 59.8
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 5.4e-36 154.8 115 63.5
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.6e-35 153.3 112 64.3
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 2.7e-35 152.5 78 97.4
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 4.6e-35 151.8 146 52.1
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 5.6e-33 144.8 104 64.4
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 2.8e-32 142.5 111 62.2
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.4e-31 140.2 154 47.4
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.2e-30 137.1 122 56.6
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 4.4e-30 135.2 99 73.7
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 4.9e-29 131.7 114 55.3
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 1.2e-27 127.1 158 42.4
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 1.5e-25 120.2 87 64.4
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 6.2e-24 114.8 69 81.2
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 6.8e-23 111.3 71 73.2
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 6.8e-23 111.3 148 37.8
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 8.9e-23 110.9 148 39.2
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.6e-22 109.4 120 44.2
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 5.8e-22 108.2 117 43.6
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.1e-20 104.0 79 62.0
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 3.2e-20 102.4 103 44.7
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 7.8e-19 97.8 87 56.3
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 1.7e-18 96.7 70 67.1
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 3.0e-18 95.9 146 32.9
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 5.1e-18 95.1 80 55.0
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 9.0e-15 84.3 82 47.6
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 7.9e-11 71.2 61 55.7
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 9.6e-09 64.3 57 54.4
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 6.9e-07 58.2 69 40.6


User provided reference genes

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