Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 1.3e-120 436.4 226 100.0
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 1.6e-102 376.3 226 86.7
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 1.6e-73 280.0 155 95.5
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 4.9e-59 231.9 227 60.4
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 2.3e-48 196.4 211 50.7
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 1.1e-47 194.1 211 49.3
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 1.3e-46 190.7 225 46.7
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 7.7e-44 181.4 215 47.4
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.3e-43 180.6 228 46.9
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 1.7e-43 180.3 166 51.8
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 1.4e-42 177.2 227 44.1
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 7.2e-42 174.9 214 47.7
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 1.6e-41 173.7 209 46.9
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 6.1e-41 171.8 218 46.8
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 1.4e-40 170.6 230 44.8
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 8.8e-40 167.9 168 48.2
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 1.1e-39 167.5 228 43.4
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 2.0e-39 166.8 222 45.0
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 4.3e-39 165.6 178 46.6
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 4.3e-39 165.6 222 45.0
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 4.3e-39 165.6 229 44.1
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 5.7e-39 165.2 220 43.6
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 7.4e-39 164.9 221 46.2
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 1.3e-38 164.1 222 44.1
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 4.8e-38 162.2 213 44.1
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 8.2e-38 161.4 227 41.9
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 1.4e-37 160.6 224 41.5
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 4.1e-37 159.1 225 44.0
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 6.9e-37 158.3 213 46.0
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 9.1e-37 157.9 221 39.8
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 9.1e-37 157.9 178 47.8
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 1.2e-36 157.5 210 41.9
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 2.0e-36 156.8 166 47.6
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 2.6e-36 156.4 219 41.6
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 3.4e-36 156.0 224 40.6
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 3.4e-36 156.0 177 45.8
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 4.5e-36 155.6 230 42.6
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 7.7e-36 154.8 219 42.5
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 1.0e-35 154.5 213 45.1
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.3e-35 154.1 213 45.5
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 1.7e-35 153.7 219 41.1
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 3.8e-35 152.5 220 41.4
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 8.5e-35 151.4 220 39.1
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 9.4e-34 147.9 214 43.9
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 1.6e-33 147.1 224 40.2
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 1.6e-33 147.1 185 42.2
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 7.9e-33 144.8 180 43.9
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 7.9e-33 144.8 168 44.6
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 1.0e-32 144.4 158 44.9
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 1.8e-32 143.7 216 40.7
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.3e-32 143.3 212 44.3
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 3.0e-32 142.9 161 46.6
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.9e-32 142.5 213 44.1
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 3.9e-32 142.5 150 49.3
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 3.3e-31 139.4 145 42.8
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 4.4e-31 139.0 168 42.9
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.7e-31 138.7 166 43.4
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 9.7e-31 137.9 168 40.5
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 1.1e-29 134.4 213 39.4
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 4.1e-29 132.5 152 44.7
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 9.1e-29 131.3 193 37.8
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 5.9e-28 128.6 222 36.0
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 3.2e-26 122.9 205 34.6
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 4.4e-23 112.5 153 39.9
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 7.5e-23 111.7 206 35.9
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 1.4e-21 107.5 123 45.5
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 4.1e-21 105.9 158 41.1
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 8.5e-19 98.2 91 51.6
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 5.5e-18 95.5 186 31.2
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 5.7e-15 85.5 230 30.9
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 3.5e-12 76.3 147 31.3
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 1.3e-11 74.3 138 40.6
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 2.9e-11 73.2 137 33.6
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.8e-11 72.8 147 34.0
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 1.9e-10 70.5 154 27.9
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 3.6e-09 66.2 176 27.3
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 6.1e-09 65.5 159 28.3
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 8.0e-09 65.1 145 29.0
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 8.0e-09 65.1 143 29.4
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 1.0e-08 64.7 166 25.9
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 1.4e-08 64.3 104 38.5
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 1.8e-08 63.9 145 27.6
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 5.2e-08 62.4 149 26.8
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 8.8e-08 61.6 155 27.7
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 8.8e-08 61.6 210 24.3
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 8.8e-08 61.6 181 27.1
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 1.2e-07 61.2 153 26.8
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 1.2e-07 61.2 150 28.7
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 1.5e-07 60.8 152 27.6
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 2.0e-07 60.5 148 27.0
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 2.0e-07 60.5 150 28.0
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 2.0e-07 60.5 150 28.0
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 2.6e-07 60.1 148 27.7
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 2.6e-07 60.1 142 24.6
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 2.6e-07 60.1 150 26.0
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 3.4e-07 59.7 152 26.3
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 4.4e-07 59.3 151 25.2
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 4.4e-07 59.3 144 26.4
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 4.4e-07 59.3 153 28.8
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 5.7e-07 58.9 223 22.0
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 5.7e-07 58.9 145 24.8
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 5.7e-07 58.9 140 26.4
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 2.2e-06 57.0 151 24.5
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 3.7e-06 56.2 134 26.1
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 3.7e-06 56.2 148 27.0
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 8.3e-06 55.1 136 26.5


User provided reference genes

Program Settings