Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 1.1e-184 649.8 339 100.0
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 2.2e-167 592.4 339 91.7
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 1.8e-134 483.0 339 76.4
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.6e-122 443.4 340 69.4
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.3e-34 151.4 383 35.5
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 3.7e-34 149.8 384 35.9
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.1e-33 148.3 372 34.1
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.5e-30 137.9 381 33.9
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.9e-30 137.5 385 34.5
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 7.2e-30 135.6 372 34.1
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 2.6e-27 127.1 373 34.6
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 4.4e-27 126.3 390 32.1
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 2.2e-26 124.0 368 32.3
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 6.3e-26 122.5 389 29.6
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 6.3e-26 122.5 373 33.5
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.1e-25 121.7 356 33.1
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.1e-25 121.7 356 33.1
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 1.8e-25 120.9 372 32.5
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 2.4e-25 120.6 359 33.4
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 2.0e-24 117.5 359 32.0
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 7.7e-24 115.5 365 29.9
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.3e-23 114.8 353 31.2
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 2.9e-23 113.6 359 32.0
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 5.0e-23 112.8 377 29.7
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 3.3e-22 110.2 373 30.6
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.3e-22 110.2 361 33.2
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 1.2e-21 108.2 382 29.6
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 4.7e-21 106.3 353 29.5
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 4.7e-21 106.3 409 29.3
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 4.7e-21 106.3 361 31.6
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 6.1e-21 105.9 354 30.5
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.0e-20 105.1 370 31.4
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 1.4e-20 104.8 351 31.6
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 1.8e-20 104.4 365 30.7
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.3e-20 104.0 356 30.6
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 4.0e-20 103.2 346 30.6
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.2e-20 102.8 356 30.3
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.9e-20 102.1 356 30.3
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.2e-19 101.7 366 28.1
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-19 101.7 355 31.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.0e-19 100.9 352 29.3
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 2.6e-19 100.5 365 30.7
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.4e-19 100.1 356 31.2
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 5.7e-19 99.4 351 31.1
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.7e-18 97.8 375 32.8
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.8e-18 97.1 360 30.3
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 2.8e-18 97.1 351 29.9
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 8.3e-18 95.5 365 30.1
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.1e-17 95.1 398 30.4
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 5.4e-17 92.8 367 28.3
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 2.0e-16 90.9 392 29.6
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 2.7e-16 90.5 155 37.4
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 5.9e-16 89.4 356 27.5
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.0e-15 88.6 367 29.4
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.0e-15 88.6 361 26.6
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.0e-15 88.6 355 31.8
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.3e-15 88.2 347 27.7
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.3e-15 87.4 305 33.1
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.9e-15 87.0 134 41.8
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 5.0e-15 86.3 171 33.3
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 6.6e-15 85.9 354 30.2
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 6.6e-15 85.9 355 32.7
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 6.6e-15 85.9 358 31.8
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 6.6e-15 85.9 347 30.5
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.9e-14 84.3 209 30.6
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.9e-14 84.3 357 30.0
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 3.3e-14 83.6 348 27.6
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 4.3e-14 83.2 353 28.6
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.3e-14 83.2 148 37.2
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 5.6e-14 82.8 375 27.5
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.3e-14 82.4 351 29.3
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.1e-13 80.9 344 30.5
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.1e-13 80.9 355 26.8
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 2.8e-13 80.5 342 28.4
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.6e-13 80.1 371 28.8
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 3.6e-13 80.1 351 29.1
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 6.1e-13 79.3 360 26.9
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 6.1e-13 79.3 345 31.0
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 6.1e-13 79.3 122 40.2
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 1.4e-12 78.2 358 27.1
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.4e-12 78.2 341 29.0
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.3e-12 77.4 166 36.7
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 4.0e-12 76.6 375 29.1
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 4.0e-12 76.6 388 27.3
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 6.8e-12 75.9 363 27.5
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 1.2e-11 75.1 339 26.8
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 3.4e-11 73.6 366 26.8
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 4.4e-11 73.2 344 25.9
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 4.4e-11 73.2 338 26.6
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 9.8e-11 72.0 370 27.3
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 9.8e-11 72.0 351 25.9
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 9.8e-11 72.0 367 28.1
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 6.4e-10 69.3 345 27.5
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 1.4e-09 68.2 123 38.2
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.2e-08 65.1 354 25.1
arahy.Tifrunner.gnm1.ann1.WJQ75P Arachis hypogaea HOM05D006874 ORTHO05D008334 1.6e-08 64.7 150 30.7
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.6e-08 64.7 351 25.4
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 2.0e-08 64.3 145 32.4
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.5e-08 63.5 351 27.4
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 4.6e-08 63.2 358 23.5
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 7.8e-08 62.4 116 31.9
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.0e-07 62.0 351 26.2
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 3.0e-07 60.5 375 26.9
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 6.6e-07 59.3 275 26.5
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 4.3e-06 56.6 350 22.6
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 7.3e-06 55.8 230 30.0


User provided reference genes

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