Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G034180 Cucumis sativus L. HOM05D008060 ORTHO05D003608 9.4e-78 293.5 153 100.0
MELO3C016740.2 Cucumis melo HOM05D008060 ORTHO05D003608 9.7e-67 256.9 153 89.5
ClCG05G019750 Citrullus lanatus HOM05D008060 ORTHO05D003608 1.4e-57 226.5 153 79.7
Sed0005091 Sechium edule HOM05D008060 ORTHO05D003608 3.4e-51 205.3 153 74.5
Manes.18G032600 Manihot esculenta HOM05D008060 ORTHO05D003608 2.4e-33 146.0 126 61.1
Atru.chr13.648 Acer truncatum HOM05D008060 ORTHO05D003608 2.0e-32 142.9 125 63.2
Gorai.010G018000 Gossypium raimondii HOM05D008060 ORTHO05D003608 3.5e-32 142.1 132 62.1
COL.COLO4_26476 Corchorus olitorius HOM05D008060 ORTHO05D003608 7.8e-32 141.0 117 65.8
Thecc.08G011100 Theobroma cacao HOM05D008060 ORTHO05D003608 1.3e-31 140.2 125 63.2
Ciclev10003142m.g Citrus clementina HOM05D008060 ORTHO05D003608 1.7e-31 139.8 125 61.6
Actinidia23264 Actinidia chinensis HOM05D008060 ORTHO05D003608 2.3e-31 139.4 126 61.9
Eucgr.C04396 Eucalyptus grandis HOM05D008060 ORTHO05D003608 3.9e-31 138.7 126 61.1
CiPaw.15G061700 Carya illinoinensis HOM05D008060 ORTHO05D003608 8.6e-31 137.5 116 62.9
TWI14G0405 Tripterygium wilfordii HOM05D008060 ORTHO05D003608 1.1e-30 137.1 131 59.5
Rhsim06G0048200 Rhododendron simsii HOM05D008060 ORTHO05D003608 1.2e-29 133.7 116 63.8
Cfa018526 Carpinus fangiana HOM05D008060 ORTHO05D003608 2.1e-29 132.9 117 63.2
Potri.014G032100 Populus trichocarpa HOM05D008060 ORTHO05D003608 6.2e-29 131.3 131 58.8
QL02p005402 Quercus lobata HOM05D008060 ORTHO05D003608 1.0e-28 130.6 122 59.8
Cpa.g.c24415.3 Carica papaya HOM05D008060 ORTHO05D003608 1.8e-28 129.8 122 57.4
TPR.G13670 Trifolium pratense HOM05D008060 ORTHO05D003608 1.8e-28 129.8 130 55.4
vmacro21539 Vaccinium macrocarpon HOM05D008060 ORTHO05D003608 3.1e-28 129.0 120 60.8
Oeu009551.5 Olea europaea HOM05D008060 ORTHO05D003608 4.0e-28 128.6 122 57.4
Oeu043550.2 Olea europaea HOM05D008060 ORTHO05D003608 5.2e-28 128.3 117 57.3
Glyma.14G081900 Glycine max HOM05D008060 ORTHO05D003608 6.8e-28 127.9 124 58.1
Glyma.17G243400 Glycine max HOM05D008060 ORTHO05D003608 1.2e-27 127.1 120 59.2
Hma1.2p1_0982F.1_g243860 Hydrangea macrophylla HOM05D008060 ORTHO05D003608 1.2e-27 127.1 119 60.5
Sc02g0007030 Simmondsia chinensis HOM05D008060 ORTHO05D003608 1.2e-27 127.1 126 56.3
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.5e-27 126.7 126 61.1
Nn1g05834 Nelumbo nucifera HOM05D008060 ORTHO05D003608 1.5e-27 126.7 122 57.4
arahy.Tifrunner.gnm1.ann1.QG0KJB Arachis hypogaea HOM05D008060 ORTHO05D003608 3.4e-27 125.6 123 57.7
arahy.Tifrunner.gnm1.ann1.RCB3UV Arachis hypogaea HOM05D008060 ORTHO05D003608 3.4e-27 125.6 123 57.7
TAR628G0327 Trochodendron aralioides HOM05D008060 ORTHO05D003608 3.4e-27 125.6 123 58.5
Ca_13301_v3 Cicer arietinum L. HOM05D008060 ORTHO05D003608 4.4e-27 125.2 161 47.2
VMungo0647G2565 Vigna mungo HOM05D008060 ORTHO05D003608 4.4e-27 125.2 130 55.4
Lj5g0024863 Lotus japonicus HOM05D008060 ORTHO05D003608 5.8e-27 124.8 117 59.0
MSTRG.1335 Avicennia marina HOM05D008060 ORTHO05D003608 1.7e-26 123.2 123 57.7
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.9e-26 122.5 124 60.5
Prupe.1G438700 Prunus persica HOM05D008060 ORTHO05D003608 2.9e-26 122.5 122 59.0
Aqoxy5G01268 Aquilegia oxysepala HOM05D008060 ORTHO05D003608 3.7e-26 122.1 121 53.7
PSO170G4922 Papaver somniferum HOM05D008060 ORTHO05D003608 3.7e-26 122.1 120 55.0
Medtr1g019790 Medicago truncatula HOM05D008060 ORTHO05D003608 8.3e-26 120.9 127 53.5
RcHm_v2.0_Chr6g0307441 Rosa chinensis HOM05D008060 ORTHO05D003608 8.3e-26 120.9 118 60.2
PSO210G0392 Papaver somniferum HOM05D008060 ORTHO05D003608 1.4e-25 120.2 120 53.3
SalBow8G2726 Salvia bowleyana HOM05D008060 ORTHO05D003608 4.1e-25 118.6 122 52.5
SalBow8G3337 Salvia bowleyana HOM05D008060 ORTHO05D003608 4.1e-25 118.6 122 52.5
Phvul.001G020900 Phaseolus vulgaris HOM05D008060 ORTHO05D003608 7.0e-25 117.9 120 55.8
Psat6g012680 Pisum sativum HOM05D008060 ORTHO05D003608 1.2e-24 117.1 128 53.9
Lsat_1_v5_gn_1_20181 Lactuca sativa HOM05D008060 ORTHO05D003608 4.6e-24 115.2 122 52.5
Sabra14G0022600 Salix brachista HOM05D008060 ORTHO05D003608 4.6e-24 115.2 119 56.3
MD08G1103600 Malus domestica HOM05D008060 ORTHO05D003608 1.3e-23 113.6 103 64.1
SalBow7G2854 Salvia bowleyana HOM05D008060 ORTHO05D003608 1.3e-23 113.6 115 52.2
MD15G1084900 Malus domestica HOM05D008060 ORTHO05D003608 1.7e-23 113.2 117 57.3
Ah.05g168850 Amaranthus hybridus HOM05D008060 ORTHO05D003608 2.3e-23 112.8 131 48.9
Lalb_Chr14g0368781 Lupinus albus HOM05D008060 ORTHO05D003608 3.0e-23 112.5 105 61.0
ECA247G0743 Erigeron canadensis HOM05D008060 ORTHO05D003608 3.9e-23 112.1 127 48.8
Migut.C00596 Erythranthe guttata HOM05D008060 ORTHO05D003608 2.5e-22 109.4 118 51.7
AUR62022431 Chenopodium quinoa HOM05D008060 ORTHO05D003608 1.2e-21 107.1 126 48.4
CANSAT54G1663 Cannabis sativa HOM05D008060 ORTHO05D003608 3.6e-21 105.5 132 52.3
Os02g0761500 Oryza sativa ssp. japonica HOM05D008060 ORTHO05D003608 4.0e-20 102.1 140 38.6
Zm00001eb193760 Zea mays HOM05D008060 ORTHO05D003608 1.2e-19 100.5 139 38.8
ATR0100G017 Amborella trichopoda HOM05D008060 ORTHO05D003608 5.8e-19 98.2 108 50.9
HPP92_016379 Vanilla planifolia HOM05D008060 ORTHO05D003608 2.9e-18 95.9 123 44.7
HanXRQChr04g0103541 Helianthus annuus HOM05D008060 ORTHO05D003608 3.7e-18 95.5 102 51.0
FAN27G2960 Fragaria x ananassa HOM05D002103 ORTHO05D007890 4.9e-18 95.1 78 65.4
SHI08293 Sapria himalayana HOM05D002103 ORTHO05D007890 5.4e-17 91.7 99 52.5
QL02p005445 Quercus lobata HOM05D008060 ORTHO05D003608 2.7e-16 89.4 71 60.6
Gohir.A06G017100 Gossypium hirsutum HOM05D008060 ORTHO05D003608 2.8e-13 79.3 95 50.5
Gohir.D06G015200 Gossypium hirsutum HOM05D008060 ORTHO05D003608 8.1e-13 77.8 91 50.5
DCAR_019463 Daucus carota HOM05D002103 ORTHO05D004020 2.9e-10 69.3 54 63.0
EL10Ac4g09956 Beta vulgaris HOM05D008060 ORTHO05D003608 1.3e-07 60.5 111 37.8


User provided reference genes

Program Settings