Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G032470 Cucumis sativus L. HOM05D003454 ORTHO05D004637 9.7e-147 523.5 266 100.0
MELO3C032229.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.5e-59 233.8 251 50.6
MELO3C033438.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.5e-59 233.8 250 51.6
MELO3C028791.2 Cucumis melo HOM05D003454 ORTHO05D004637 3.8e-58 229.2 247 51.8
MELO3C030551.2 Cucumis melo HOM05D003454 ORTHO05D004637 3.8e-58 229.2 251 50.6
MELO3C035613.2 Cucumis melo HOM05D003454 ORTHO05D004637 6.4e-58 228.4 251 51.8
MELO3C030049.2 Cucumis melo HOM05D003454 ORTHO05D004637 3.2e-57 226.1 251 53.4
MELO3C030879.2 Cucumis melo HOM05D003454 ORTHO05D004637 3.2e-57 226.1 229 52.0
MELO3C031466.2 Cucumis melo HOM05D003454 ORTHO05D004637 7.1e-57 224.9 251 51.8
MELO3C028999.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.7e-56 223.0 251 51.4
MELO3C033948.2 Cucumis melo HOM05D003454 ORTHO05D004637 3.0e-55 219.5 244 50.4
MELO3C033965.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.5e-54 217.2 240 52.1
MELO3C034880.2 Cucumis melo HOM05D003454 ORTHO05D004637 4.8e-53 212.2 235 51.1
MELO3C029729.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.1e-52 211.1 225 51.6
MELO3C030690.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.1e-52 211.1 219 56.6
MELO3C033931.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.3e-52 208.8 234 49.1
MELO3C032237.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.0e-51 206.8 222 51.4
MELO3C034415.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.3e-50 204.1 235 48.5
MELO3C032474.2 Cucumis melo HOM05D003454 ORTHO05D004637 4.9e-50 202.2 235 49.4
MELO3C028724.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.5e-49 198.7 237 48.9
MELO3C033237.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.5e-49 198.7 223 50.2
MELO3C034549.2 Cucumis melo HOM05D003454 ORTHO05D004637 4.6e-48 195.7 223 48.9
MELO3C029209.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.0e-47 194.5 223 48.4
MELO3C034808.2 Cucumis melo HOM05D003454 ORTHO05D004637 3.9e-47 192.6 237 46.0
MELO3C031933.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.1e-47 192.2 251 47.4
MELO3C032753.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.5e-46 189.9 246 48.0
MELO3C030832.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.6e-45 187.2 208 48.6
MELO3C028702.2 Cucumis melo HOM05D003454 ORTHO05D004637 6.2e-45 185.3 235 45.5
MELO3C033866.2 Cucumis melo HOM05D003454 ORTHO05D004637 7.6e-43 178.3 153 60.1
MELO3C028790.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.3e-42 177.6 250 44.4
MELO3C033366.2 Cucumis melo HOM05D003454 ORTHO05D004637 9.3e-41 171.4 152 59.9
MELO3C030741.2 Cucumis melo HOM05D003454 ORTHO05D004637 8.7e-39 164.9 227 44.9
MELO3C028694.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.5e-38 164.1 248 37.9
MELO3C034742.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.5e-38 164.1 233 42.9
MELO3C030139.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.7e-38 162.2 187 47.1
CsaV3_2G013980 Cucumis sativus L. HOM05D003454 ORTHO05D004637 4.1e-36 156.0 214 43.5
MELO3C028969.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.0e-35 153.7 229 40.6
MELO3C030867.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.1e-33 147.9 196 45.9
CsaV3_1G020730 Cucumis sativus L. HOM05D003454 ORTHO05D004637 7.2e-33 145.2 131 56.5
MELO3C030858.2 Cucumis melo HOM05D003454 ORTHO05D004637 8.8e-31 138.3 215 40.5
MELO3C032678.2 Cucumis melo HOM05D003454 ORTHO05D004637 4.3e-30 136.0 168 47.6
MELO3C032182.2 Cucumis melo HOM05D003454 ORTHO05D004637 7.4e-30 135.2 235 35.3
MELO3C033280.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.7e-29 134.0 250 38.0
MELO3C033267.2 Cucumis melo HOM05D003454 ORTHO05D004637 4.1e-28 129.4 134 52.2
CsaV3_4G030830 Cucumis sativus L. HOM05D003454 ORTHO05D004637 3.4e-27 126.3 132 56.8
MELO3C029235.2 Cucumis melo HOM05D003454 ORTHO05D004637 4.5e-27 125.9 109 57.8
MELO3C030164.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.0e-26 122.5 169 41.4
MELO3C032223.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.5e-25 119.0 170 44.1
MELO3C033181.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.6e-24 117.5 222 36.0
MELO3C030127.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.1e-24 117.1 187 36.4
MELO3C032125.2 Cucumis melo HOM05D003454 ORTHO05D004637 7.9e-24 115.2 162 44.4
MELO3C029700.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.8e-23 114.0 98 61.2
MELO3C026381.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.1e-23 112.5 196 34.7
CsaV3_4G030450 Cucumis sativus L. HOM05D003454 ORTHO05D004637 6.7e-23 112.1 218 34.9
MELO3C034403.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.1e-22 111.3 99 57.6
ClCG04G001140 Citrullus lanatus HOM05D003454 ORTHO05D000001 1.5e-19 100.9 112 47.3
CsaV3_1G019590 Cucumis sativus L. HOM05D003454 ORTHO05D004637 5.9e-19 99.0 100 51.0
MELO3C025816.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.0e-18 98.2 113 47.8
MELO3C034402.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.0e-18 98.2 84 59.5
Medtr3g451050 Medicago truncatula HOM05D003454 ORTHO05D004637 3.8e-18 96.3 180 31.7
MELO3C027754.2 Cucumis melo HOM05D003454 ORTHO05D004637 8.5e-18 95.1 81 56.8
MELO3C029208.2 Cucumis melo HOM05D003454 ORTHO05D004637 4.2e-17 92.8 204 35.8
ClCG00G000730 Citrullus lanatus HOM05D003454 ORTHO05D004637 5.5e-17 92.4 127 40.2
MELO3C025815.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.5e-17 92.4 259 28.6
MELO3C032719.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.2e-16 91.3 180 35.0
MELO3C004782.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.7e-16 90.1 91 51.6
MELO3C034818.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.2e-15 85.9 170 34.1
MELO3C029620.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.6e-14 83.6 107 44.9
MELO3C018301.2 Cucumis melo HOM05D003454 ORTHO05D004637 7.4e-14 82.0 156 36.5
Medtr6g053160 Medicago truncatula HOM05D003454 ORTHO05D004637 7.4e-14 82.0 150 31.3
ClCG06G010670 Citrullus lanatus HOM05D003454 ORTHO05D004637 9.7e-14 81.6 89 49.4
MELO3C030881.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.7e-13 80.9 138 37.7
Medtr3g009370 Medicago truncatula HOM05D003454 ORTHO05D004637 3.7e-13 79.7 154 30.5
ClCG10G010950 Citrullus lanatus HOM05D003454 ORTHO05D004637 8.2e-13 78.6 166 38.0
ClCG11G006870 Citrullus lanatus HOM05D003454 ORTHO05D004637 8.2e-13 78.6 143 39.2
MELO3C030149.2 Cucumis melo HOM05D003454 ORTHO05D004637 8.2e-13 78.6 62 59.7
MELO3C033410.2 Cucumis melo HOM05D003454 ORTHO05D004637 9.1e-12 75.1 85 43.5
MELO3C016150.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.2e-11 74.7 122 36.9
MELO3C003267.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.6e-11 74.3 72 52.8
MELO3C029504.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.6e-11 74.3 122 41.8
MELO3C028877.2 Cucumis melo HOM05D003454 ORTHO05D000001 2.6e-11 73.6 69 59.4
ClCG03G012230 Citrullus lanatus HOM05D003454 ORTHO05D004637 1.7e-10 70.9 194 32.0
MELO3C027616.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.2e-10 70.5 65 52.3
CsaV3_4G010230 Cucumis sativus L. HOM05D003454 ORTHO05D004637 2.2e-10 70.5 56 58.9
ClCG11G009730 Citrullus lanatus HOM05D003454 ORTHO05D004637 1.5e-09 67.8 98 41.8
MELO3C029066.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.9e-09 67.4 69 53.6
ClCG01G012630 Citrullus lanatus HOM05D003454 ORTHO05D034650 2.1e-08 63.9 117 35.0
MELO3C029454.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.7e-08 63.5 49 63.3
MELO3C033278.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.7e-08 63.5 67 56.7
MELO3C003232.2 Cucumis melo HOM05D003454 ORTHO05D004637 6.1e-08 62.4 45 64.4
CANSAT80G2564 Cannabis sativa HOM05D014718 ORTHO05D002074 8.0e-08 62.0 150 28.7
CANSAT89G0004 Cannabis sativa HOM05D014718 ORTHO05D002074 1.0e-07 61.6 150 28.0
ClCG00G000570 Citrullus lanatus HOM05D009366 ORTHO05D012221 1.0e-07 61.6 47 59.6
ClCG00G000840 Citrullus lanatus HOM05D009366 ORTHO05D012221 1.0e-07 61.6 47 59.6
CsaV3_7G021870 Cucumis sativus L. HOM05D003454 ORTHO05D004637 1.8e-07 60.8 78 39.7
CANSAT01G0417 Cannabis sativa HOM05D014718 ORTHO05D002074 3.0e-07 60.1 150 28.0
ClCG07G007190 Citrullus lanatus HOM05D003454 ORTHO05D004637 3.0e-07 60.1 127 33.9
ClCG05G014520 Citrullus lanatus HOM05D003454 ORTHO05D004637 4.0e-07 59.7 147 29.9
CANSAT54G1326 Cannabis sativa HOM05D014718 ORTHO05D002074 5.2e-07 59.3 154 25.3
Medtr4g031775 Medicago truncatula HOM05D003454 ORTHO05D004637 5.2e-07 59.3 116 32.8
MELO3C003873.2 Cucumis melo HOM05D003454 ORTHO05D004637 6.7e-07 58.9 63 47.6
CANSAT78G2340 Cannabis sativa HOM05D014718 ORTHO05D002074 8.8e-07 58.5 199 25.6
ClCG09G014230 Citrullus lanatus HOM05D009366 ORTHO05D012221 2.0e-06 57.4 112 34.8
ClCG08G004810 Citrullus lanatus HOM05D009366 ORTHO05D012221 4.4e-06 56.2 46 54.3
ClCG08G003400 Citrullus lanatus HOM05D003454 ORTHO05D004637 5.7e-06 55.8 64 46.9
ClCG02G008100 Citrullus lanatus HOM05D003454 ORTHO05D004637 9.7e-06 55.1 121 33.9


User provided reference genes

Program Settings