Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G032250 Cucumis sativus L. HOM05D000001 ORTHO05D172029 7.2e-35 151.8 72 100.0
Peaxi162Scf00032g00002 Petunia axillaris HOM05D000001 ORTHO05D000003 4.1e-14 82.8 69 53.6
ClCG11G016730 Citrullus lanatus HOM05D000001 ORTHO05D000003 2.0e-13 80.5 43 88.4
Eucgr.G01109 Eucalyptus grandis HOM05D000001 ORTHO05D000003 3.0e-12 76.6 58 63.8
Sed0024248 Sechium edule HOM05D000001 ORTHO05D000003 8.6e-12 75.1 41 87.8
GSVIVG01038381001 Vitis vinifera HOM05D000001 ORTHO05D000003 9.5e-11 71.6 61 57.4
Thhalv10006886m.g Eutrema salsugineum HOM05D000001 ORTHO05D010365 1.5e-08 64.3 69 50.7
CARHR031870 Cardamine hirsuta HOM05D000001 ORTHO05D010365 2.0e-08 63.9 69 49.3
Duzib138G0014 Durio zibethinus HOM05D000001 ORTHO05D000003 2.6e-08 63.5 47 61.7
Psat0s2083g0040 Pisum sativum HOM05D000230 ORTHO05D011671 2.2e-07 60.5 40 67.5
AT1G32415 Arabidopsis thaliana HOM05D000001 ORTHO05D010365 8.3e-07 58.5 64 45.3
QL05p081300 Quercus lobata HOM05D000001 ORTHO05D000003 1.1e-06 58.2 70 38.6
TAR636G3465 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.1e-06 58.2 66 45.5
MSTRG.10709 Avicennia marina HOM05D000001 ORTHO05D000003 1.4e-06 57.8 68 42.6
Haze_07082 Corylus avellana HOM05D000001 ORTHO05D000003 1.4e-06 57.8 68 41.2
Aa31LG2G13530 Aethionema arabicum HOM05D000001 ORTHO05D010365 1.9e-06 57.4 64 43.8
Gohir.D11G268600 Gossypium hirsutum HOM05D000001 ORTHO05D000003 1.9e-06 57.4 70 40.0
Gorai.007G288400 Gossypium raimondii HOM05D000001 ORTHO05D000003 1.9e-06 57.4 70 40.0
MBI07_g42020_MAGBIO Magnolia biondii HOM05D000052 ORTHO05D009792 1.9e-06 57.4 70 41.4
Psat0ss25761g0120 Pisum sativum HOM05D000735 ORTHO05D004613 1.9e-06 57.4 41 63.4
TPR.G14537 Trifolium pratense HOM05D000001 ORTHO05D009488 2.4e-06 57.0 72 33.3
GSVIVG01024761001 Vitis vinifera HOM05D000001 ORTHO05D000003 2.4e-06 57.0 70 38.6
ECA247G0402 Erigeron canadensis HOM05D002015 ORTHO05D007291 3.2e-06 56.6 65 41.5
Thhalv10023310m.g Eutrema salsugineum HOM05D000001 ORTHO05D000003 3.2e-06 56.6 63 42.9
Psat4g185320 Pisum sativum HOM05D001395 ORTHO05D015826 3.2e-06 56.6 40 65.0
Aa31LG1G21460 Aethionema arabicum HOM05D000001 ORTHO05D009270 4.1e-06 56.2 69 40.6
BcaB07g32926 Brassica carinata HOM05D000001 ORTHO05D010365 4.1e-06 56.2 64 43.8
Duzib177G1124 Durio zibethinus HOM05D000001 ORTHO05D000003 4.1e-06 56.2 70 38.6
Ca_13939_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 5.4e-06 55.8 72 41.7
HanXRQChr09g0266341 Helianthus annuus HOM05D000001 ORTHO05D000003 5.4e-06 55.8 70 40.0
TWI60G1198 Tripterygium wilfordii HOM05D000001 ORTHO05D000003 5.4e-06 55.8 58 41.4
AagrBONN_evm.TU.Sc2ySwM_228.1963 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.0e-06 55.5 66 43.9
A09p33750 Brassica napus HOM05D000001 ORTHO05D010365 7.0e-06 55.5 64 42.2
BraA09t38924Z Brassica rapa HOM05D000001 ORTHO05D010365 7.0e-06 55.5 64 42.2
Migut.K00307 Erythranthe guttata HOM05D000001 ORTHO05D000003 7.0e-06 55.5 68 41.2
Lj5g0019104 Lotus japonicus HOM05D000001 ORTHO05D009574 7.0e-06 55.5 61 41.0
Thecc.05G293500 Theobroma cacao HOM05D000001 ORTHO05D000003 7.0e-06 55.5 70 38.6
C05p31880 Brassica napus HOM05D000001 ORTHO05D010365 9.2e-06 55.1 64 42.2
BolC5t31916H Brassica oleracea HOM05D000001 ORTHO05D010365 9.2e-06 55.1 64 42.2
Gohir.A11G258500 Gossypium hirsutum HOM05D000001 ORTHO05D000003 9.2e-06 55.1 70 38.6


User provided reference genes

Program Settings