Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 7.3e-96 354.0 191 100.0
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 3.3e-88 328.6 191 94.2
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 3.8e-76 288.5 192 85.9
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 1.2e-69 266.9 194 78.4
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 5.3e-54 214.9 163 74.8
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 1.0e-52 210.7 151 76.2
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 6.5e-52 208.0 164 71.3
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 1.1e-51 207.2 190 66.8
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 1.9e-51 206.5 158 73.4
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.2e-51 205.7 166 71.1
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 5.5e-51 204.9 183 69.4
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 5.5e-51 204.9 155 74.8
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 5.5e-51 204.9 155 74.8
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.2e-50 203.8 159 73.6
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 1.0e-49 200.7 155 72.9
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 1.3e-49 200.3 169 71.0
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 8.7e-49 197.6 165 69.7
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 8.7e-49 197.6 150 74.0
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 1.1e-48 197.2 168 67.9
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 1.9e-48 196.4 184 63.6
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 4.3e-48 195.3 184 63.0
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 4.3e-48 195.3 163 66.9
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 7.4e-48 194.5 194 68.0
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 2.1e-47 193.0 175 65.7
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 3.7e-47 192.2 195 66.2
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 4.8e-47 191.8 185 62.7
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 8.2e-47 191.0 192 62.0
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 1.4e-46 190.3 180 66.7
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.8e-46 189.9 122 80.3
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 3.1e-46 189.1 157 72.6
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 4.1e-46 188.7 168 66.1
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 4.1e-46 188.7 119 81.5
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 4.1e-46 188.7 185 62.7
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 5.3e-46 188.3 158 70.9
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 6.9e-46 188.0 176 64.8
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 9.0e-46 187.6 144 73.6
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 1.2e-45 187.2 191 61.3
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 1.2e-45 187.2 194 60.8
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 1.5e-45 186.8 175 64.0
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 1.5e-45 186.8 192 61.5
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 2.6e-45 186.0 125 80.0
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 3.4e-45 185.7 155 71.0
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 7.6e-45 184.5 185 60.5
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 7.6e-45 184.5 180 60.0
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 1.0e-44 184.1 153 72.5
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 1.3e-44 183.7 144 72.2
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 1.7e-44 183.3 149 72.5
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.2e-44 183.0 176 64.8
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.9e-44 182.6 166 67.5
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 3.8e-44 182.2 163 67.5
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 5.0e-44 181.8 176 64.2
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 5.0e-44 181.8 154 64.9
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 6.5e-44 181.4 166 66.9
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.4e-43 180.3 176 64.2
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 1.9e-43 179.9 176 63.6
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 3.2e-43 179.1 154 72.1
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 3.2e-43 179.1 181 63.5
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 3.2e-43 179.1 164 65.2
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 3.2e-43 179.1 175 61.1
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 4.2e-43 178.7 165 65.5
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 9.3e-43 177.6 168 66.1
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 2.7e-42 176.0 145 70.3
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 2.7e-42 176.0 145 70.3
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 2.7e-42 176.0 145 70.3
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 7.9e-42 174.5 147 72.8
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 1.0e-41 174.1 144 69.4
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 3.9e-41 172.2 121 81.8
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 3.9e-41 172.2 199 57.8
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.7e-41 171.4 122 75.4
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 8.7e-41 171.0 122 77.9
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 1.5e-40 170.2 166 60.8
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 1.9e-40 169.9 144 68.1
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.9e-40 169.9 127 76.4
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 2.5e-40 169.5 184 62.0
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 3.3e-40 169.1 124 76.6
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 5.7e-40 168.3 184 57.6
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 1.3e-39 167.2 122 76.2
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 3.7e-39 165.6 194 59.8
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 6.3e-39 164.9 128 73.4
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.4e-38 163.7 148 66.9
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.8e-38 163.3 182 60.4
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 2.4e-38 162.9 147 59.9
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 4.1e-38 162.2 98 84.7
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 2.0e-37 159.8 174 60.9
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 1.0e-36 157.5 172 56.4
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 3.2e-35 152.5 153 62.7
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 3.2e-35 152.5 122 68.9
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 4.2e-35 152.1 87 87.4
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 6.1e-34 148.3 141 59.6
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.4e-33 147.1 100 77.0
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 1.4e-33 147.1 159 56.6
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 1.4e-33 147.1 124 67.7
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 1.1e-30 137.5 146 56.8
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 2.6e-29 132.9 138 58.7
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 7.7e-29 131.3 178 54.5
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 7.7e-29 131.3 178 54.5
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 5.0e-28 128.6 127 59.8
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 5.0e-28 128.6 132 57.6
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 3.2e-27 125.9 177 49.2
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 2.1e-26 123.2 140 52.9
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 3.6e-26 122.5 124 60.5
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 8.8e-25 117.9 97 69.1
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.5e-24 117.1 83 75.9
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 2.6e-24 116.3 124 55.6
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 2.2e-23 113.2 161 48.4
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 1.4e-22 110.5 154 44.8
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.8e-22 110.2 81 75.3
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.8e-22 110.2 81 75.3
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 2.1e-18 96.7 128 49.2
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 2.7e-18 96.3 100 62.0
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 6.7e-17 91.7 91 57.1
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 4.8e-15 85.5 80 60.0
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 5.9e-13 78.6 194 34.0
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 1.2e-10 70.9 90 46.7
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 1.8e-06 57.0 69 36.2


User provided reference genes

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