Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G031570 Cucumis sativus L. HOM05D000004 ORTHO05D000034 3.2e-50 201.4 101 100.0
ClCG08G003900 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.7e-14 82.8 87 46.0
ClCG04G003440 Citrullus lanatus HOM05D000004 ORTHO05D000034 5.3e-13 77.8 87 43.7
ClCG02G010440 Citrullus lanatus HOM05D000004 ORTHO05D000002 7.0e-13 77.4 87 46.0
ClCG01G012390 Citrullus lanatus HOM05D000004 ORTHO05D000034 6.5e-11 70.9 79 41.8
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-10 69.7 84 46.4
Sed0000778 Sechium edule HOM05D000004 ORTHO05D000034 5.5e-10 67.8 88 42.0
CSS0041497 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-09 66.2 84 44.0
MELO3C035074.2 Cucumis melo HOM05D008649 ORTHO05D009980 3.6e-09 65.1 86 40.7
Oeu000030.1 Olea europaea HOM05D000004 ORTHO05D000224 8.0e-09 63.9 88 38.6
Oeu055756.1 Olea europaea HOM05D008284 ORTHO05D000224 8.0e-09 63.9 88 38.6
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-08 63.5 84 42.9
MELO3C029130.2 Cucumis melo HOM05D008649 ORTHO05D000224 1.0e-08 63.5 86 39.5
Oeu026329.1 Olea europaea HOM05D008284 ORTHO05D000034 1.0e-08 63.5 91 38.5
CANSAT25G2214 Cannabis sativa HOM05D000004 ORTHO05D000034 1.4e-08 63.2 100 34.0
Oeu045839.1 Olea europaea HOM05D000004 ORTHO05D000224 1.4e-08 63.2 88 37.5
Oeu049534.1 Olea europaea HOM05D000004 ORTHO05D000224 1.4e-08 63.2 87 39.1
Oeu043235.1 Olea europaea HOM05D008284 ORTHO05D000224 2.3e-08 62.4 88 38.6
MELO3C033733.2 Cucumis melo HOM05D000004 ORTHO05D000224 3.0e-08 62.0 87 39.1
Oeu055711.1 Olea europaea HOM05D008284 ORTHO05D000224 3.0e-08 62.0 88 38.6
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.0e-08 61.6 81 40.7
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 4.0e-08 61.6 88 35.2
Oeu045669.1 Olea europaea HOM05D008284 ORTHO05D000224 4.0e-08 61.6 96 36.5
Oeu045843.1 Olea europaea HOM05D008284 ORTHO05D000224 4.0e-08 61.6 88 39.8
Oeu047013.1 Olea europaea HOM05D008284 ORTHO05D000034 5.2e-08 61.2 88 36.4
Oeu056160.1 Olea europaea HOM05D000004 ORTHO05D000224 5.2e-08 61.2 78 41.0
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.7e-08 60.8 81 40.7
MELO3C028093.2 Cucumis melo HOM05D000004 ORTHO05D000034 6.7e-08 60.8 83 38.6
Sopen04g016360 Solanum pennellii HOM05D000004 ORTHO05D000034 6.7e-08 60.8 101 40.6
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.8e-08 60.5 81 39.5
MELO3C033978.2 Cucumis melo HOM05D008649 ORTHO05D000034 8.8e-08 60.5 87 36.8
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 8.8e-08 60.5 91 34.1
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.8e-08 60.5 91 34.1
ClCG09G013920 Citrullus lanatus HOM05D000004 ORTHO05D000224 1.1e-07 60.1 73 41.1
MELO3C030797.2 Cucumis melo HOM05D000004 ORTHO05D000002 1.1e-07 60.1 86 38.4
Oeu019592.1 Olea europaea HOM05D008284 ORTHO05D000224 1.1e-07 60.1 88 36.4
Oeu064005.1 Olea europaea HOM05D000004 ORTHO05D000034 1.1e-07 60.1 81 40.7
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.5e-07 59.7 81 39.5
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-07 59.3 81 39.5
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-07 58.9 81 39.5
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.6e-07 58.9 81 38.3
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.3e-07 58.5 91 29.7
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-07 58.5 81 38.3
CANSAT25G2080 Cannabis sativa HOM05D000004 ORTHO05D000034 3.3e-07 58.5 100 33.0
Oeu009202.1 Olea europaea HOM05D008284 ORTHO05D000224 3.3e-07 58.5 78 39.7
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 3.3e-07 58.5 91 38.5
SHI51976 Sapria himalayana HOM05D000004 ORTHO05D000002 3.3e-07 58.5 97 33.0
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 4.4e-07 58.2 87 35.6
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 4.4e-07 58.2 86 34.9
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 4.4e-07 58.2 91 38.5
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-07 58.2 91 38.5
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-07 58.2 91 38.5
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 4.4e-07 58.2 91 38.5
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 4.4e-07 58.2 91 38.5
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 4.4e-07 58.2 91 38.5
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 4.4e-07 58.2 91 38.5
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 4.4e-07 58.2 91 38.5
PSO541G5277 Papaver somniferum HOM05D000004 ORTHO05D000224 4.4e-07 58.2 91 38.5
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 4.4e-07 58.2 91 38.5
SHI33345 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-07 58.2 97 34.0
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.7e-07 57.8 81 37.0
Oeu002304.1 Olea europaea HOM05D000004 ORTHO05D000224 5.7e-07 57.8 94 35.1
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 5.7e-07 57.8 88 35.2
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 5.7e-07 57.8 91 38.5
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 5.7e-07 57.8 91 38.5
CANSAT11G1607 Cannabis sativa HOM05D000004 ORTHO05D000034 7.5e-07 57.4 100 32.0
CANSAT64G1493 Cannabis sativa HOM05D000004 ORTHO05D000034 7.5e-07 57.4 100 32.0
CANSAT80G1570 Cannabis sativa HOM05D000004 ORTHO05D000034 7.5e-07 57.4 89 33.7
Oeu055575.1 Olea europaea HOM05D008284 ORTHO05D000224 7.5e-07 57.4 91 35.2
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-07 57.0 78 38.5
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-07 57.0 81 38.3
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 9.7e-07 57.0 91 37.4
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 1.3e-06 56.6 99 37.4
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 1.3e-06 56.6 91 37.4
PSO675G0717 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 56.6 92 37.0
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.7e-06 56.2 81 34.6
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-06 56.2 99 37.4
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-06 56.2 91 35.2
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.7e-06 56.2 73 39.7
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.7e-06 56.2 73 39.7
Oeu050755.1 Olea europaea HOM05D008284 ORTHO05D000034 2.2e-06 55.8 91 35.2
Sopen05g024090 Solanum pennellii HOM05D000004 ORTHO05D000034 2.2e-06 55.8 75 40.0
MELO3C035055.2 Cucumis melo HOM05D000004 ORTHO05D000002 2.8e-06 55.5 84 35.7
Oeu011745.1 Olea europaea HOM05D000004 ORTHO05D000224 2.8e-06 55.5 81 34.6
Oeu018971.1 Olea europaea HOM05D008284 ORTHO05D000224 2.8e-06 55.5 91 36.3
PSO384G3945 Papaver somniferum HOM05D000004 ORTHO05D000224 2.8e-06 55.5 96 33.3
Sopen03g016010 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-06 55.5 101 32.7
Oeu033066.1 Olea europaea HOM05D008284 ORTHO05D000224 3.7e-06 55.1 86 36.0
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 3.7e-06 55.1 93 34.4
SHI25940 Sapria himalayana HOM05D000004 ORTHO05D000002 3.7e-06 55.1 96 32.3
CANSAT78G2221 Cannabis sativa HOM05D000004 ORTHO05D000034 4.8e-06 54.7 99 30.3
CiPaw.05G010700 Carya illinoinensis HOM05D000004 ORTHO05D000034 4.8e-06 54.7 92 34.8
Sopen01g025880 Solanum pennellii HOM05D000004 ORTHO05D000034 4.8e-06 54.7 58 46.6
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 6.3e-06 54.3 81 40.7
MELO3C029021.2 Cucumis melo HOM05D008649 ORTHO05D009980 6.3e-06 54.3 54 51.9
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 6.3e-06 54.3 90 28.9
Sopen06g008860 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 54.3 96 33.3
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.2e-06 53.9 91 28.6
CSS0021557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.2e-06 53.9 63 44.4
PSO339G1570 Papaver somniferum HOM05D000004 ORTHO05D000224 8.2e-06 53.9 91 35.2
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 8.2e-06 53.9 91 37.4
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 8.2e-06 53.9 101 31.7


User provided reference genes

Program Settings