Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 2.0e-124 449.1 229 100.0
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 3.6e-73 278.9 160 91.2
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 1.1e-61 240.7 135 91.1
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 7.7e-52 208.0 131 82.4
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 8.6e-43 177.9 120 75.0
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 1.1e-42 177.6 132 71.2
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 1.5e-42 177.2 131 72.5
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 1.5e-42 177.2 132 72.0
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.9e-42 176.8 120 72.5
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 2.5e-42 176.4 121 74.4
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 5.6e-42 175.3 133 71.4
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 7.3e-42 174.9 131 71.0
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.2e-41 174.1 132 68.2
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 1.2e-41 174.1 139 66.2
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.6e-41 173.7 136 66.2
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.6e-41 173.7 121 75.2
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 2.8e-41 172.9 120 73.3
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 2.8e-41 172.9 117 76.9
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 3.6e-41 172.6 131 69.5
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 3.6e-41 172.6 119 73.1
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 4.7e-41 172.2 125 74.4
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 4.7e-41 172.2 132 72.0
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 4.7e-41 172.2 120 74.2
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 4.7e-41 172.2 170 55.3
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 6.1e-41 171.8 116 74.1
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 8.0e-41 171.4 145 66.9
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.4e-40 170.6 146 63.0
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.4e-40 170.6 119 70.6
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 1.8e-40 170.2 112 74.1
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 2.3e-40 169.9 108 82.4
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 3.1e-40 169.5 138 68.8
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 3.1e-40 169.5 125 73.6
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 3.1e-40 169.5 118 72.9
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 3.1e-40 169.5 120 72.5
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 3.1e-40 169.5 131 67.2
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 4.0e-40 169.1 104 83.7
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 4.0e-40 169.1 125 73.6
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 5.2e-40 168.7 127 66.9
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 5.2e-40 168.7 123 69.9
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 5.2e-40 168.7 132 66.7
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 6.8e-40 168.3 108 80.6
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 6.8e-40 168.3 120 70.8
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 8.9e-40 167.9 124 75.0
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 8.9e-40 167.9 131 68.7
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 8.9e-40 167.9 121 70.2
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 1.2e-39 167.5 131 67.9
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 1.2e-39 167.5 131 67.9
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 1.2e-39 167.5 123 69.9
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 1.5e-39 167.2 131 68.7
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 1.5e-39 167.2 120 70.8
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 2.0e-39 166.8 124 74.2
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 2.0e-39 166.8 131 67.2
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 2.6e-39 166.4 138 67.4
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 2.6e-39 166.4 132 70.5
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 2.6e-39 166.4 131 67.9
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 3.4e-39 166.0 126 69.8
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 3.4e-39 166.0 116 70.7
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 4.4e-39 165.6 131 66.4
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 5.8e-39 165.2 132 68.9
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 5.8e-39 165.2 131 67.2
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 7.5e-39 164.9 131 64.9
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 7.5e-39 164.9 120 70.8
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 9.8e-39 164.5 120 70.0
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.3e-38 164.1 119 68.9
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 1.7e-38 163.7 132 66.7
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 2.2e-38 163.3 131 66.4
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 2.9e-38 162.9 107 74.8
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 3.7e-38 162.5 120 69.2
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 4.9e-38 162.2 115 72.2
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.4e-38 161.8 132 68.9
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.4e-38 161.8 120 70.0
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.4e-38 161.8 120 70.0
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 8.3e-38 161.4 132 66.7
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 8.3e-38 161.4 117 74.4
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.1e-37 161.0 131 66.4
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 1.1e-37 161.0 112 73.2
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.4e-37 160.6 121 66.9
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 2.4e-37 159.8 132 65.2
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 7.0e-37 158.3 121 66.9
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.0e-37 158.3 134 67.2
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.0e-37 158.3 134 67.2
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 7.0e-37 158.3 123 67.5
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 9.2e-37 157.9 134 67.2
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.2e-37 157.9 134 67.2
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.2e-37 157.9 134 67.2
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.2e-37 157.9 134 67.2
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.2e-36 157.5 132 65.2
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 1.2e-36 157.5 102 76.5
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.2e-36 157.5 121 68.6
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-36 156.8 134 66.4
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-36 156.8 104 76.9
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 2.7e-36 156.4 131 63.4
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 4.6e-36 155.6 119 67.2
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.0e-35 154.5 104 76.0
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 1.3e-35 154.1 108 74.1
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 1.3e-35 154.1 127 66.1
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 1.3e-35 154.1 108 74.1
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 1.3e-35 154.1 108 74.1
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.3e-35 154.1 132 63.6
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 3.0e-35 152.9 136 64.0
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.0e-35 152.9 136 64.0
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 3.0e-35 152.9 131 61.1
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 3.9e-35 152.5 120 63.3
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 1.9e-34 150.2 131 64.1
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 5.6e-34 148.7 116 64.7
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 7.3e-34 148.3 118 66.9
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.8e-33 146.4 132 61.4
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 2.8e-33 146.4 131 61.1
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 2.8e-33 146.4 131 58.8
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 6.2e-33 145.2 131 61.1
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 8.0e-33 144.8 90 77.8
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.1e-32 144.4 132 60.6
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.1e-32 144.4 90 77.8
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.1e-32 144.4 90 76.7
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.3e-32 143.3 132 59.8
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 4.0e-32 142.5 116 62.9
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 6.8e-32 141.7 120 60.8
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 2.6e-31 139.8 109 64.2
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 7.5e-31 138.3 107 62.6
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.3e-30 137.5 98 70.4
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 3.7e-30 136.0 110 65.5
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 2.1e-28 130.2 119 58.0
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 2.7e-28 129.8 117 61.5
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 7.8e-28 128.3 116 57.8
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 8.6e-27 124.8 108 65.7
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-26 124.4 94 68.1
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 1.1e-21 107.8 90 57.8
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.4e-21 107.5 85 71.8
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 2.3e-19 100.1 104 50.0
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 5.1e-19 99.0 104 48.1
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 2.1e-17 93.6 104 46.2
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.2e-17 92.0 55 74.5
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 1.4e-16 90.9 104 45.2
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 7.8e-12 75.1 52 67.3
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 3.0e-11 73.2 91 46.2
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 9.6e-10 68.2 97 39.2
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 1.1e-08 64.7 58 65.5
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.5e-07 60.8 118 32.2
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 1.3e-06 57.8 66 65.2


User provided reference genes

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