Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 3.2e-69 265.0 136 100.0
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 3.9e-67 258.1 136 97.1
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 3.2e-61 238.4 136 91.2
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 1.6e-52 209.5 136 83.1
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 9.3e-45 183.7 138 71.0
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 3.5e-44 181.8 141 66.7
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 4.6e-44 181.4 138 65.9
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 4.6e-44 181.4 135 72.6
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 6.0e-44 181.0 140 68.6
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 7.9e-44 180.6 129 73.6
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 7.9e-44 180.6 136 71.3
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 1.0e-43 180.3 129 69.8
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 1.3e-43 179.9 121 77.7
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 1.8e-43 179.5 109 78.0
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 1.8e-43 179.5 135 72.6
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 3.0e-43 178.7 138 68.8
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 6.7e-43 177.6 134 70.1
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 6.7e-43 177.6 123 77.2
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 6.7e-43 177.6 130 70.0
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 8.7e-43 177.2 140 66.4
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.1e-42 176.8 137 67.9
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 1.9e-42 176.0 132 69.7
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 2.5e-42 175.6 125 72.0
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 3.3e-42 175.3 103 81.6
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 3.3e-42 175.3 103 81.6
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 4.3e-42 174.9 137 67.2
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 4.3e-42 174.9 134 68.7
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 5.6e-42 174.5 137 67.2
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 7.4e-42 174.1 127 70.9
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 1.3e-41 173.3 129 71.3
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.6e-41 172.9 141 66.0
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 1.6e-41 172.9 128 68.8
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 4.8e-41 171.4 131 67.9
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 6.2e-41 171.0 140 65.7
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 6.2e-41 171.0 141 65.2
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 6.2e-41 171.0 112 75.9
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 8.1e-41 170.6 93 86.0
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 8.1e-41 170.6 132 65.2
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 2.4e-40 169.1 128 67.2
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 4.0e-40 168.3 137 65.7
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 4.0e-40 168.3 122 71.3
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 4.0e-40 168.3 119 73.1
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 5.3e-40 167.9 99 80.8
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 5.3e-40 167.9 105 80.0
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 9.0e-40 167.2 114 73.7
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 9.0e-40 167.2 119 72.3
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.2e-39 166.8 94 81.9
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 1.5e-39 166.4 139 64.0
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 1.5e-39 166.4 105 80.0
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 2.0e-39 166.0 101 80.2
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 2.0e-39 166.0 120 71.7
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 2.6e-39 165.6 105 80.0
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 3.4e-39 165.2 102 79.4
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 3.4e-39 165.2 102 79.4
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 9.9e-39 163.7 98 80.6
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 1.3e-38 163.3 129 66.7
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 3.8e-38 161.8 102 78.4
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 3.8e-38 161.8 102 78.4
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 3.8e-38 161.8 125 68.8
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 3.8e-38 161.8 113 73.5
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 4.9e-38 161.4 119 68.1
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 6.4e-38 161.0 101 75.2
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 1.4e-37 159.8 125 70.4
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 1.4e-37 159.8 130 66.2
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 1.6e-36 156.4 106 70.8
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 1.6e-36 156.4 98 74.5
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 4.6e-36 154.8 132 63.6
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 7.9e-36 154.1 132 62.9
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 1.0e-35 153.7 105 68.6
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 1.8e-35 152.9 127 62.2
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.3e-35 152.5 146 58.9
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 2.3e-35 152.5 141 61.7
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 2.5e-34 149.1 106 67.0
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 4.3e-34 148.3 115 68.7
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 1.3e-33 146.7 112 68.8
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.4e-32 143.3 118 65.3
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 2.4e-32 142.5 133 57.9
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 2.4e-32 142.5 99 70.7
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 6.9e-32 141.0 110 68.2
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 1.2e-31 140.2 105 71.4
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.5e-31 139.8 113 64.6
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 5.8e-31 137.9 114 64.9
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 5.8e-31 137.9 137 55.5
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 2.9e-30 135.6 109 68.8
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 6.5e-30 134.4 114 63.2
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 6.5e-30 134.4 125 61.6
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 8.4e-30 134.0 102 62.7
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 1.1e-29 133.7 80 82.5
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.4e-29 133.3 106 66.0
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 2.5e-29 132.5 110 65.5
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 7.1e-29 131.0 150 52.7
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 9.3e-29 130.6 83 74.7
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 2.1e-28 129.4 127 52.8
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 4.6e-28 128.3 92 64.1
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.3e-26 122.1 111 61.3
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 4.3e-26 121.7 94 67.0
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 9.7e-26 120.6 77 71.4
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 6.3e-25 117.9 103 58.3
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 3.1e-24 115.5 63 81.0
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 5.3e-24 114.8 73 71.2
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.4e-21 106.7 102 57.8
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 4.8e-17 91.7 52 82.7
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 1.2e-15 87.0 93 53.8
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 5.9e-15 84.7 43 83.7
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 1.6e-12 76.6 110 40.0
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 2.4e-08 62.8 72 54.2
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 2.6e-07 59.3 103 40.8


User provided reference genes

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