Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 4.6e-100 367.9 182 100.0
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 3.5e-79 298.5 158 93.7
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 6.8e-67 257.7 162 85.8
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 1.4e-32 143.7 190 50.5
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 5.4e-32 141.7 134 61.2
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 1.7e-30 136.7 181 48.6
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 1.1e-29 134.0 183 51.9
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 3.3e-29 132.5 181 49.2
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 5.6e-29 131.7 190 48.9
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 1.2e-28 130.6 205 44.4
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 1.2e-28 130.6 193 47.7
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 2.8e-28 129.4 180 50.0
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 2.8e-28 129.4 186 47.3
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.6e-28 129.0 211 45.0
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 4.7e-28 128.6 166 48.2
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 3.4e-26 122.5 188 45.7
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 3.4e-26 122.5 185 48.6
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 4.4e-26 122.1 187 48.7
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 2.2e-25 119.8 168 46.4
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 3.8e-25 119.0 165 46.1
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 4.9e-25 118.6 187 47.1
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 8.4e-25 117.9 166 47.6
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.9e-24 116.7 196 44.9
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 2.4e-24 116.3 196 44.9
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.2e-24 115.9 190 43.2
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 7.1e-24 114.8 187 47.1
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 7.1e-24 114.8 166 45.2
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 7.1e-24 114.8 196 44.9
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 9.3e-24 114.4 187 44.4
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 9.3e-24 114.4 187 47.1
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 1.6e-23 113.6 170 48.2
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 1.6e-23 113.6 186 43.0
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 2.1e-23 113.2 167 46.1
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 2.1e-23 113.2 181 43.6
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 2.7e-23 112.8 195 40.5
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 2.7e-23 112.8 186 45.7
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 4.6e-23 112.1 170 48.2
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 4.6e-23 112.1 182 44.0
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.0e-22 110.9 178 46.1
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 1.3e-22 110.5 193 42.5
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 3.9e-22 109.0 197 39.6
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 3.9e-22 109.0 189 42.9
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 5.1e-22 108.6 185 42.2
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 1.1e-21 107.5 194 41.8
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 1.5e-21 107.1 140 46.4
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 2.5e-21 106.3 167 43.1
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 7.3e-21 104.8 190 41.1
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 7.3e-21 104.8 188 40.4
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.3e-20 104.0 174 44.3
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 2.1e-20 103.2 187 41.7
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 2.8e-20 102.8 204 42.6
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 3.6e-20 102.4 176 42.0
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 4.8e-20 102.1 171 42.7
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 1.1e-19 100.9 166 44.0
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 1.8e-19 100.1 199 43.7
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 4.0e-19 99.0 172 42.4
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 5.3e-19 98.6 179 41.3
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.2e-18 97.4 174 44.3
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 2.6e-18 96.3 152 44.1
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.6e-18 96.3 150 45.3
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 4.5e-18 95.5 170 43.5
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 1.4e-16 90.5 169 40.8
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 1.2e-15 87.4 181 40.9
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 1.2e-15 87.4 192 37.0
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.1e-15 86.7 166 42.8
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 1.8e-14 83.6 164 39.6
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 2.3e-14 83.2 199 36.2
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 6.7e-14 81.6 158 42.4
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 8.7e-14 81.3 187 36.4
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 8.7e-14 81.3 168 39.3
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 8.7e-14 81.3 217 35.5
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 1.1e-13 80.9 102 51.0
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 1.1e-13 80.9 230 33.9
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 3.3e-13 79.3 230 31.3
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 3.3e-13 79.3 164 38.4
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 1.6e-12 77.0 219 30.6
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 2.8e-12 76.3 219 32.0
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 8.1e-12 74.7 217 31.8
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 1.1e-11 74.3 223 33.2
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 1.4e-11 73.9 226 32.3
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 1.4e-11 73.9 221 30.8
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 1.4e-11 73.9 221 30.8
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 1.8e-11 73.6 224 33.9
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 1.8e-11 73.6 225 29.3
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 3.1e-11 72.8 202 32.2
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 3.1e-11 72.8 221 32.1
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 4.0e-11 72.4 221 29.9
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 9.0e-11 71.2 198 33.3
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 1.2e-10 70.9 198 31.8
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 1.2e-10 70.9 198 31.8
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 7.6e-10 68.2 217 30.4
PGSC0003DMG401029181 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.9e-08 63.5 73 54.8
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 4.6e-07 58.9 218 30.3
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 4.6e-07 58.9 218 30.3
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 4.6e-07 58.9 144 37.5
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 1.0e-06 57.8 163 38.7
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 3.0e-06 56.2 199 31.7


User provided reference genes

Program Settings