Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 1.1e-107 393.3 202 100.0
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 1.9e-94 349.4 202 86.1
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 5.7e-75 284.6 202 71.8
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 7.0e-65 251.1 200 59.0
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 1.3e-63 246.9 200 59.5
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 3.0e-63 245.7 199 61.3
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 1.4e-60 236.9 199 59.3
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 3.4e-59 232.3 199 56.3
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 4.9e-58 228.4 199 55.8
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 4.1e-57 225.3 199 56.3
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 1.3e-55 220.3 200 53.5
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 3.9e-55 218.8 200 54.0
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 8.6e-55 217.6 200 50.5
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 8.6e-55 217.6 199 54.8
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 4.3e-54 215.3 200 53.0
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 5.6e-54 214.9 200 53.0
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 9.5e-54 214.2 200 53.5
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 4.0e-52 208.8 197 50.8
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 4.0e-52 208.8 199 50.8
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 3.4e-51 205.7 200 50.0
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 5.8e-51 204.9 198 50.0
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 5.8e-51 204.9 200 52.0
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 7.6e-51 204.5 198 51.0
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 7.6e-51 204.5 198 50.0
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 7.6e-51 204.5 198 50.0
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 7.6e-51 204.5 200 52.0
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 8.3e-50 201.1 193 52.3
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.1e-49 200.7 198 49.0
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 1.9e-49 199.9 194 52.6
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 2.4e-49 199.5 198 48.5
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 4.1e-49 198.7 198 49.5
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 5.4e-49 198.4 199 48.7
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 3.5e-48 195.7 201 50.2
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 1.3e-47 193.7 200 47.5
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 1.7e-47 193.4 201 49.3
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 3.0e-47 192.6 199 47.2
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 3.9e-47 192.2 194 47.9
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 1.1e-46 190.7 198 46.0
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 5.6e-46 188.3 199 45.7
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 1.2e-45 187.2 193 48.7
MELO3C026013.2 Cucumis melo HOM05D004264 ORTHO05D004680 2.8e-45 186.0 107 89.7
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 4.7e-45 185.3 198 47.0
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 1.1e-44 184.1 203 45.3
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 1.8e-44 183.3 194 44.8
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 6.8e-44 181.4 200 44.0
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 8.9e-44 181.0 199 43.7
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 1.5e-43 180.3 199 43.7
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 2.6e-43 179.5 199 47.7
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 1.7e-42 176.8 199 44.7
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 4.9e-42 175.3 194 46.9
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 1.4e-41 173.7 200 42.5
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 1.9e-41 173.3 199 42.7
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 1.6e-40 170.2 214 43.5
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 4.6e-40 168.7 191 42.9
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 1.1e-38 164.1 200 41.0
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 4.3e-38 162.2 199 39.2
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 2.8e-37 159.5 199 41.2
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 3.1e-36 156.0 271 35.1
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 1.5e-35 153.7 200 42.5
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 2.6e-35 152.9 200 38.5
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 2.2e-34 149.8 199 37.2
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 2.2e-34 149.8 199 37.2
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 1.9e-33 146.7 199 37.7
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 9.3e-33 144.4 194 42.8
Zm00001eb068100 Zea mays HOM05D004264 ORTHO05D004680 1.7e-31 140.2 196 38.3
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 1.9e-30 136.7 198 39.4
SEGI_36861 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 2.5e-30 136.3 198 36.4
BcaB04g18563 Brassica carinata HOM05D004264 ORTHO05D004680 2.8e-29 132.9 195 35.9
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 3.6e-29 132.5 199 37.7
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 6.2e-29 131.7 199 37.2
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 5.3e-28 128.6 185 37.3
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 5.3e-28 128.6 199 37.2
Rhsim05G0223700 Rhododendron simsii HOM05D004264 ORTHO05D004680 2.0e-27 126.7 91 64.8
QL07p034201 Quercus lobata HOM05D004264 ORTHO05D004680 3.4e-27 125.9 107 55.1
Cc05_g01720 Coffea canephora HOM05D004264 ORTHO05D004680 7.6e-27 124.8 195 35.9
Zm00001eb423320 Zea mays HOM05D004264 ORTHO05D004680 1.1e-25 120.9 162 40.1
Haze_21059 Corylus avellana HOM05D004264 ORTHO05D004680 1.4e-25 120.6 107 53.3
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 2.7e-24 116.3 205 38.5
Sc09g0006620 Simmondsia chinensis HOM05D004264 ORTHO05D004680 3.5e-24 115.9 148 40.5
Peaxi162Scf00522g00315 Petunia axillaris HOM05D004264 ORTHO05D004680 6.7e-23 111.7 143 40.6
Aa31LG1G23180 Aethionema arabicum HOM05D004264 ORTHO05D004680 1.5e-22 110.5 163 41.7
GSVIVG01030301001 Vitis vinifera HOM05D004264 ORTHO05D004680 1.9e-22 110.2 107 50.5
C03p43950 Brassica napus HOM05D004264 ORTHO05D004680 5.6e-22 108.6 184 34.8
Cpa.g.sc120.22 Carica papaya HOM05D004264 ORTHO05D004680 9.6e-22 107.8 113 47.8
RcHm_v2.0_Chr3g0462181 Rosa chinensis HOM05D004264 ORTHO05D004680 2.1e-21 106.7 107 49.5
FAN14G2539 Fragaria x ananassa HOM05D004264 ORTHO05D004680 6.2e-21 105.1 107 47.7
RcHm_v2.0_Chr3g0462171 Rosa chinensis HOM05D004264 ORTHO05D004680 1.1e-20 104.4 86 54.7
FvH4_6g10920 Fragaria vesca HOM05D004264 ORTHO05D004680 2.4e-20 103.2 107 47.7
Rhsim05G0223600 Rhododendron simsii HOM05D004264 ORTHO05D004680 2.4e-20 103.2 107 51.4
FvH4_6g10921 Fragaria vesca HOM05D004264 ORTHO05D004680 6.9e-20 101.7 86 54.7
vmacro20314 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 6.9e-20 101.7 107 45.8
Prupe.6G283000 Prunus persica HOM05D004264 ORTHO05D004680 9.0e-20 101.3 107 47.7
Aqoxy3G03064 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 3.4e-19 99.4 93 49.5
Oeu005191.1 Olea europaea HOM05D004264 ORTHO05D004680 1.0e-18 97.8 58 70.7
CSS0010779 Camellia sinensis var. sinensis HOM05D004264 ORTHO05D004680 1.3e-18 97.4 84 58.3
Sopen04g028370 Solanum pennellii HOM05D004264 ORTHO05D004680 1.3e-18 97.4 107 45.8
Eucgr.G00894 Eucalyptus grandis HOM05D004264 ORTHO05D004680 1.7e-18 97.1 107 44.9
Gohir.D11G227700 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.2e-18 96.7 107 45.8
TAR209G0008 Trochodendron aralioides HOM05D004264 ORTHO05D004680 1.1e-17 94.4 108 47.2
Gohir.D10G240300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.2e-17 92.8 107 44.9
Haze_21060 Corylus avellana HOM05D004264 ORTHO05D004680 4.2e-17 92.4 115 44.3
Gorai.011G276000 Gossypium raimondii HOM05D004264 ORTHO05D004680 4.2e-17 92.4 107 44.9
Ciclev10013172m.g Citrus clementina HOM05D004264 ORTHO05D004680 7.1e-17 91.7 107 40.2
HanXRQChr13g0390251 Helianthus annuus HOM05D004264 ORTHO05D004680 9.3e-17 91.3 61 65.6
vmacro05245 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 1.2e-16 90.9 107 43.9
vmacro05226 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 2.1e-16 90.1 107 43.9
DCAR_018676 Daucus carota HOM05D004264 ORTHO05D004680 2.7e-16 89.7 107 42.1
HanXRQChr13g0390241 Helianthus annuus HOM05D004264 ORTHO05D004680 3.5e-16 89.4 107 44.9
PGSC0003DMG400031135 Solanum tuberosum HOM05D004264 ORTHO05D004680 4.6e-16 89.0 57 66.7
unitig_0.g2545 Utricularia gibba HOM05D004264 ORTHO05D004680 4.6e-16 89.0 90 44.4
Gorai.004G074900 Gossypium raimondii HOM05D004264 ORTHO05D004680 7.9e-16 88.2 127 41.7
unitig_88.g27662 Utricularia gibba HOM05D004264 ORTHO05D004680 1.8e-15 87.0 203 30.5
HanXRQChr02g0036811 Helianthus annuus HOM05D004264 ORTHO05D004680 2.3e-15 86.7 107 42.1
Potri.012G107200 Populus trichocarpa HOM05D004264 ORTHO05D004680 3.0e-15 86.3 58 63.8
DCAR_018675 Daucus carota HOM05D004264 ORTHO05D004680 5.1e-15 85.5 58 69.0
CAN.G564.4 Capsicum annuum HOM05D004264 ORTHO05D004680 1.1e-14 84.3 165 32.7
SEGI_24150 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 1.5e-14 84.0 88 43.2
Ca_07679_v3 Cicer arietinum L. HOM05D004264 ORTHO05D004680 1.9e-14 83.6 56 60.7
HanXRQChr02g0036821 Helianthus annuus HOM05D004264 ORTHO05D004680 2.5e-14 83.2 58 60.3
TPR.G1155 Trifolium pratense HOM05D004264 ORTHO05D004680 3.3e-14 82.8 69 50.7
Os04g0445400 Oryza sativa ssp. japonica HOM05D004264 ORTHO05D004680 4.3e-14 82.4 190 28.4
VMungo1215G3396 Vigna mungo HOM05D004264 ORTHO05D004680 4.3e-14 82.4 56 58.9
arahy.Tifrunner.gnm1.ann1.IC5F1T Arachis hypogaea HOM05D004264 ORTHO05D004680 5.7e-14 82.0 79 44.3
Aqoxy3G03065 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 9.6e-14 81.3 99 43.4
Cpa.g.sc82.40 Carica papaya HOM05D004264 ORTHO05D004680 1.6e-13 80.5 95 44.2
Gohir.D12G051300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.6e-13 80.5 78 47.4
arahy.Tifrunner.gnm1.ann1.G0I7HS Arachis hypogaea HOM05D004264 ORTHO05D004680 2.1e-13 80.1 79 43.0
Gohir.D01G029100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.1e-13 80.1 78 47.4
Oeu041877.1 Olea europaea HOM05D004264 ORTHO05D004680 2.8e-13 79.7 52 63.5
Oeu041878.1 Olea europaea HOM05D004264 ORTHO05D004680 2.8e-13 79.7 52 63.5
BcaB04g18568 Brassica carinata HOM05D004264 ORTHO05D004680 4.8e-13 79.0 126 34.9
BcaC01g04201 Brassica carinata HOM05D004264 ORTHO05D004680 4.8e-13 79.0 126 34.9
Gohir.D04G142200 Gossypium hirsutum HOM05D004264 ORTHO05D004680 4.8e-13 79.0 78 47.4
MSTRG.5553 Avicennia marina HOM05D004264 ORTHO05D004680 1.8e-12 77.0 99 42.4
BolC1t05486H Brassica oleracea HOM05D004264 ORTHO05D004680 1.8e-12 77.0 108 38.9
Migut.J00116 Erythranthe guttata HOM05D004264 ORTHO05D004680 1.8e-12 77.0 57 63.2
PSO782G0806 Papaver somniferum HOM05D004264 ORTHO05D004680 3.1e-12 76.3 73 56.2
Gorai.004G095600 Gossypium raimondii HOM05D004264 ORTHO05D004680 1.5e-11 73.9 86 44.2
Gorai.011G076200 Gossypium raimondii HOM05D004264 ORTHO05D004680 5.0e-10 68.9 73 45.2
BcaNung00021 Brassica carinata HOM05D004264 ORTHO05D004680 3.2e-09 66.2 103 35.9
BcaC04g20357 Brassica carinata HOM05D004264 ORTHO05D004680 1.6e-08 63.9 102 34.3
C03p54850 Brassica napus HOM05D004264 ORTHO05D004680 1.6e-08 63.9 102 33.3
Migut.J00117 Erythranthe guttata HOM05D004264 ORTHO05D004680 3.5e-08 62.8 95 34.7
A03p36330 Brassica napus HOM05D004264 ORTHO05D004680 4.6e-08 62.4 100 35.0
A03p61420 Brassica napus HOM05D004264 ORTHO05D004680 4.6e-08 62.4 102 33.3
HPP92_011366 Vanilla planifolia HOM05D004264 ORTHO05D004680 1.0e-07 61.2 107 33.6
Migut.D01629 Erythranthe guttata HOM05D004264 ORTHO05D004680 1.8e-07 60.5 107 32.7
SMO364G0587 Selaginella moellendorffii HOM05D004264 ORTHO05D004680 1.8e-07 60.5 150 27.3
BraA03t12802Z Brassica rapa HOM05D004264 ORTHO05D004680 3.0e-07 59.7 100 34.0
BcaB05g23097 Brassica carinata HOM05D004264 ORTHO05D004680 3.9e-07 59.3 102 32.4
SEGI_29872 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 4.3e-06 55.8 105 33.3


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