Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 6.9e-27 123.2 63 100.0
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 2.5e-21 104.8 63 87.3
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 3.3e-21 104.4 63 85.7
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 2.1e-20 101.7 63 85.7
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.5e-18 95.5 62 80.6
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 2.0e-18 95.1 62 80.6
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 2.0e-18 95.1 62 79.0
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 2.6e-18 94.7 62 75.8
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 3.4e-18 94.4 62 79.0
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 4.5e-18 94.0 62 75.8
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 5.9e-18 93.6 63 76.2
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 7.6e-18 93.2 62 77.4
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 7.6e-18 93.2 62 77.4
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 1.0e-17 92.8 59 78.0
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.0e-17 92.8 62 74.2
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 1.3e-17 92.4 62 75.8
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 1.7e-17 92.0 62 75.8
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 1.7e-17 92.0 62 72.6
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.7e-17 92.0 62 72.6
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.7e-17 92.0 62 72.6
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.7e-17 92.0 62 77.4
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 1.7e-17 92.0 62 72.6
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 2.2e-17 91.7 62 77.4
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 2.2e-17 91.7 62 77.4
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 2.2e-17 91.7 62 75.8
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.2e-17 91.7 59 78.0
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 2.9e-17 91.3 59 76.3
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 2.9e-17 91.3 63 76.2
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.9e-17 91.3 59 79.7
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.9e-17 91.3 59 79.7
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 2.9e-17 91.3 59 72.9
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 2.9e-17 91.3 59 78.0
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 2.9e-17 91.3 59 76.3
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 3.8e-17 90.9 62 77.4
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 3.8e-17 90.9 62 75.8
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 5.0e-17 90.5 62 74.2
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 5.0e-17 90.5 62 74.2
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 5.0e-17 90.5 62 74.2
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 5.0e-17 90.5 59 79.7
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 5.0e-17 90.5 59 79.7
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 6.5e-17 90.1 62 75.8
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 6.5e-17 90.1 62 75.8
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 8.5e-17 89.7 59 76.3
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 8.5e-17 89.7 62 74.2
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 8.5e-17 89.7 62 71.0
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 8.5e-17 89.7 63 73.0
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.1e-16 89.4 62 74.2
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 1.1e-16 89.4 62 74.2
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 1.1e-16 89.4 62 74.2
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.4e-16 89.0 62 72.6
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 1.4e-16 89.0 62 72.6
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.9e-16 88.6 62 71.0
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.9e-16 88.6 62 75.8
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 3.2e-16 87.8 63 68.3
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 3.2e-16 87.8 63 68.3
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 3.2e-16 87.8 63 69.8
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 3.2e-16 87.8 62 71.0
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 3.2e-16 87.8 62 71.0
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 3.2e-16 87.8 59 72.9
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 3.2e-16 87.8 59 74.6
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 3.2e-16 87.8 62 74.2
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 3.2e-16 87.8 62 74.2
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 4.2e-16 87.4 63 69.8
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 4.2e-16 87.4 63 69.8
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 4.2e-16 87.4 63 69.8
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 4.2e-16 87.4 63 69.8
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 4.2e-16 87.4 63 69.8
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 5.5e-16 87.0 59 74.6
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 5.5e-16 87.0 63 69.8
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 5.5e-16 87.0 62 71.0
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 5.5e-16 87.0 59 74.6
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 7.2e-16 86.7 59 76.3
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 7.2e-16 86.7 62 74.2
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 7.2e-16 86.7 62 74.2
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 9.3e-16 86.3 63 73.0
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 1.2e-15 85.9 62 69.4
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 1.2e-15 85.9 59 72.9
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.6e-15 85.5 62 69.4
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.6e-15 85.5 62 74.2
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 1.6e-15 85.5 63 68.3
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.6e-15 85.5 62 71.0
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.1e-15 85.1 62 72.6
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.1e-15 85.1 59 71.2
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.1e-15 85.1 62 71.0
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.1e-15 85.1 62 71.0
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.7e-15 84.7 62 69.4
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 2.7e-15 84.7 59 72.9
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.6e-15 84.0 62 69.4
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.6e-15 84.0 62 71.0
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.6e-15 84.0 62 71.0
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 7.9e-15 83.2 61 67.2
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 7.9e-15 83.2 59 71.2
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.0e-14 82.8 59 71.2
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.0e-14 82.8 62 66.1
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.0e-14 82.8 62 66.1
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.3e-14 82.4 63 65.1
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 1.8e-14 82.0 62 67.7
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 2.3e-14 81.6 59 71.2
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 2.3e-14 81.6 62 67.7
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 3.9e-14 80.9 63 68.3
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 5.1e-14 80.5 59 67.8
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.6e-12 75.5 62 59.7
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.8e-12 74.7 62 61.3
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 4.8e-12 73.9 62 58.1
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 4.8e-12 73.9 62 58.1
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 8.2e-12 73.2 62 59.7
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 2.4e-11 71.6 61 57.4
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 4.1e-11 70.9 62 59.7
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 2.1e-07 58.5 58 50.0
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 3.6e-07 57.8 31 80.6


User provided reference genes

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