Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G012220 Cucumis sativus L. HOM05D003389 ORTHO05D003917 1.0e-31 139.4 69 100.0
Cpa.g.sc29.33 Carica papaya HOM05D003389 ORTHO05D003917 7.9e-08 60.1 36 77.8
Cc08_g13790 Coffea canephora HOM05D003389 ORTHO05D003917 1.0e-07 59.7 37 75.7
Atru.chr9.1507 Acer truncatum HOM05D003389 ORTHO05D003917 1.3e-07 59.3 37 73.0
CAN.G981.56 Capsicum annuum HOM05D003389 ORTHO05D003917 1.3e-07 59.3 36 77.8
Peaxi162Scf00620g00617 Petunia axillaris HOM05D003389 ORTHO05D003917 1.3e-07 59.3 36 77.8
Phvul.002G153200 Phaseolus vulgaris HOM05D003389 ORTHO05D003917 1.3e-07 59.3 36 77.8
Sopen08g028470 Solanum pennellii HOM05D003389 ORTHO05D003917 1.3e-07 59.3 36 77.8
SGA_v2.0_scaffold144G35980 Striga asiatica HOM05D003389 ORTHO05D003917 1.3e-07 59.3 36 77.8
CsaV3_5G003350 Cucumis sativus L. HOM05D003389 ORTHO05D003917 2.3e-07 58.5 36 77.8
Sed0023838 Sechium edule HOM05D003389 ORTHO05D003917 2.3e-07 58.5 36 77.8
COL.COLO4_23793 Corchorus olitorius HOM05D003389 ORTHO05D003917 3.0e-07 58.2 36 75.0
Dinv37703 Davidia involucrata HOM05D003389 ORTHO05D003917 3.9e-07 57.8 38 71.1
PGSC0003DMG400022735 Solanum tuberosum HOM05D003389 ORTHO05D003917 3.9e-07 57.8 36 75.0
arahy.Tifrunner.gnm1.ann1.18T4MA Arachis hypogaea HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
arahy.Tifrunner.gnm1.ann1.HGX6IC Arachis hypogaea HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
CSS0044016 Camellia sinensis var. sinensis HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Cfa012079 Carpinus fangiana HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
CiPaw.12G100200 Carya illinoinensis HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Ciclev10019075m.g Citrus clementina HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Dinv39033 Davidia involucrata HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Duzib068G0926 Durio zibethinus HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Duzib084G0706 Durio zibethinus HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Glyma.01G214700 Glycine max HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Glyma.03G264902 Glycine max HOM05D003389 ORTHO05D003917 5.1e-07 57.4 35 77.1
Glyma.04G257602 Glycine max HOM05D003389 ORTHO05D003917 5.1e-07 57.4 35 77.1
Gohir.A08G177400 Gossypium hirsutum HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Gohir.D08G195800 Gossypium hirsutum HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Gorai.004G206500 Gossypium raimondii HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Lalb_Chr09g0324691 Lupinus albus HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
MD04G1069900 Malus domestica HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
Nitab4.5_0008362g0010 Nicotiana tabacum HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
RcHm_v2.0_Chr7g0199771 Rosa chinensis HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
VMungo1215G1985 Vigna mungo HOM05D003389 ORTHO05D003917 5.1e-07 57.4 36 75.0
ECA240G1577 Erigeron canadensis HOM05D003389 ORTHO05D003917 6.7e-07 57.0 38 71.1
Glyma.11G027200 Glycine max HOM05D003389 ORTHO05D003917 6.7e-07 57.0 36 75.0
Lj2C200G2 Lonicera japonica HOM05D003389 ORTHO05D003917 6.7e-07 57.0 36 75.0
Lj2C201G3 Lonicera japonica HOM05D003389 ORTHO05D003917 6.7e-07 57.0 36 75.0
PGR031G2775 Punica granatum HOM05D003389 ORTHO05D003917 6.7e-07 57.0 36 72.2
Sed0009929 Sechium edule HOM05D003389 ORTHO05D003917 6.7e-07 57.0 36 75.0
CiPaw.11G142600 Carya illinoinensis HOM05D003389 ORTHO05D003917 8.7e-07 56.6 36 72.2
Gohir.A09G193500 Gossypium hirsutum HOM05D003389 ORTHO05D003917 8.7e-07 56.6 36 75.0
Gohir.D11G020800 Gossypium hirsutum HOM05D003389 ORTHO05D003917 8.7e-07 56.6 36 75.0
Gorai.006G210500 Gossypium raimondii HOM05D003389 ORTHO05D003917 8.7e-07 56.6 36 75.0
MD06G1071400 Malus domestica HOM05D003389 ORTHO05D003917 8.7e-07 56.6 36 72.2
Nn6g34315 Nelumbo nucifera HOM05D003389 ORTHO05D003917 8.7e-07 56.6 37 70.3
Potri.001G112300 Populus trichocarpa HOM05D003389 ORTHO05D003917 8.7e-07 56.6 36 72.2
Potri.003G119800 Populus trichocarpa HOM05D003389 ORTHO05D003917 8.7e-07 56.6 36 72.2
Ah.12g057800 Amaranthus hybridus HOM05D003389 ORTHO05D003917 1.1e-06 56.2 38 68.4
CSS0021110 Camellia sinensis var. sinensis HOM05D003389 ORTHO05D003917 1.1e-06 56.2 36 72.2
Gohir.D09G187700 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.1e-06 56.2 36 72.2
Hma1.2p1_0138F.1_g062730 Hydrangea macrophylla HOM05D003389 ORTHO05D003917 1.1e-06 56.2 36 72.2
Sabra01G0085800 Salix brachista HOM05D003389 ORTHO05D003917 1.1e-06 56.2 36 72.2
TWI15G1193 Tripterygium wilfordii HOM05D003389 ORTHO05D003917 1.1e-06 56.2 36 72.2
TWI81G0612 Tripterygium wilfordii HOM05D003389 ORTHO05D003917 1.1e-06 56.2 36 72.2
EL10Ac5g12710 Beta vulgaris HOM05D003389 ORTHO05D003917 1.5e-06 55.8 35 74.3
MBI11_g05095_MAGBIO Magnolia biondii HOM05D003389 ORTHO05D003917 1.5e-06 55.8 37 67.6
Manes.02G030300 Manihot esculenta HOM05D003389 ORTHO05D003917 1.5e-06 55.8 36 72.2
Prupe.5G088000 Prunus persica HOM05D003389 ORTHO05D003917 1.5e-06 55.8 36 72.2
Duzib205G0992 Durio zibethinus HOM05D003389 ORTHO05D003917 1.9e-06 55.5 36 72.2
Eucgr.D01938 Eucalyptus grandis HOM05D003389 ORTHO05D003917 1.9e-06 55.5 36 72.2
FvH4_5g01250 Fragaria vesca HOM05D003389 ORTHO05D003917 1.9e-06 55.5 38 68.4
FAN04G3242 Fragaria x ananassa HOM05D003389 ORTHO05D003917 1.9e-06 55.5 38 68.4
FAN08G2451 Fragaria x ananassa HOM05D003389 ORTHO05D003917 1.9e-06 55.5 38 68.4
FAN13G0159 Fragaria x ananassa HOM05D003389 ORTHO05D003917 1.9e-06 55.5 38 68.4
FAN18G0817 Fragaria x ananassa HOM05D003389 ORTHO05D003917 1.9e-06 55.5 38 68.4
Nn1g01292 Nelumbo nucifera HOM05D003389 ORTHO05D003917 1.9e-06 55.5 37 67.6
Nitab4.5_0001714g0090 Nicotiana tabacum HOM05D003389 ORTHO05D003917 1.9e-06 55.5 35 74.3
PSO478G1498 Papaver somniferum HOM05D003389 ORTHO05D003917 1.9e-06 55.5 37 64.9
PSO782G1906 Papaver somniferum HOM05D003389 ORTHO05D003917 1.9e-06 55.5 37 64.9
Migut.E01161 Erythranthe guttata HOM05D003389 ORTHO05D003917 2.5e-06 55.1 38 63.2
Lj2g0004762 Lotus japonicus HOM05D003389 ORTHO05D003917 2.5e-06 55.1 36 69.4
Sabra03G0084000 Salix brachista HOM05D003389 ORTHO05D003917 2.5e-06 55.1 36 69.4
Hund11535 Selenicereus undatus HOM05D003389 ORTHO05D003917 2.5e-06 55.1 37 67.6
TAR636G0614 Trochodendron aralioides HOM05D003389 ORTHO05D003917 2.5e-06 55.1 37 64.9
TAR636G1874 Trochodendron aralioides HOM05D003389 ORTHO05D003917 2.5e-06 55.1 37 64.9
GSVIVG01019881001 Vitis vinifera HOM05D003389 ORTHO05D003917 2.5e-06 55.1 36 72.2
Gohir.A11G021100 Gossypium hirsutum HOM05D003389 ORTHO05D003917 3.3e-06 54.7 36 72.2
Gorai.007G022100 Gossypium raimondii HOM05D003389 ORTHO05D003917 3.3e-06 54.7 36 72.2
QL12p016621 Quercus lobata HOM05D003389 ORTHO05D003917 3.3e-06 54.7 38 63.2
Sc07g0009480 Simmondsia chinensis HOM05D003389 ORTHO05D003917 3.3e-06 54.7 36 69.4
Actinidia05234 Actinidia chinensis HOM05D003389 ORTHO05D003917 4.3e-06 54.3 38 65.8
Manes.01G069600 Manihot esculenta HOM05D003389 ORTHO05D003917 4.3e-06 54.3 36 72.2
Medtr5g011090 Medicago truncatula HOM05D003389 ORTHO05D003917 4.3e-06 54.3 36 69.4
Psat2g181120 Pisum sativum HOM05D003389 ORTHO05D003917 4.3e-06 54.3 36 69.4
SalBow1G6995 Salvia bowleyana HOM05D003262 ORTHO05D003917 4.3e-06 54.3 36 69.4
Thecc.03G268500 Theobroma cacao HOM05D003389 ORTHO05D003917 4.3e-06 54.3 36 72.2
CANSAT21G1884 Cannabis sativa HOM05D003389 ORTHO05D003917 5.6e-06 53.9 36 69.4
Ca_06667_v3 Cicer arietinum L. HOM05D003389 ORTHO05D003917 5.6e-06 53.9 36 69.4
Oeu001902.1 Olea europaea HOM05D003389 ORTHO05D003917 5.6e-06 53.9 36 69.4
SEGI_34401 Sequoiadendron giganteum HOM05D003389 ORTHO05D003917 5.6e-06 53.9 37 62.2
SGA_v2.0_scaffold286G47125 Striga asiatica HOM05D003389 ORTHO05D003917 5.6e-06 53.9 36 66.7
Aa31LG9G10590 Aethionema arabicum HOM05D003389 ORTHO05D003917 7.4e-06 53.5 36 66.7
AT4G11860 Arabidopsis thaliana HOM05D003389 ORTHO05D003917 7.4e-06 53.5 36 66.7
Carub.0006s3095 Capsella rubella HOM05D003389 ORTHO05D003917 7.4e-06 53.5 36 66.7
Aqoxy5G03952 Aquilegia oxysepala HOM05D003389 ORTHO05D003917 9.6e-06 53.1 38 57.9
BcaB01g01683 Brassica carinata HOM05D003389 ORTHO05D003917 9.6e-06 53.1 36 63.9
CDE04G0877 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 9.6e-06 53.1 37 62.2
CDE12G0774 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 9.6e-06 53.1 38 65.8


User provided reference genes

Program Settings