Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G011870 Cucumis sativus L. HOM05D000691 ORTHO05D000378 9.1e-84 313.5 159 100.0
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 7.9e-11 71.2 103 42.7
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 7.9e-11 71.2 103 41.7
RcHm_v2.0_Chr2g0137481 Rosa chinensis HOM05D000691 ORTHO05D000378 1.0e-10 70.9 103 41.7
MELO3C030703.2 Cucumis melo HOM05D010785 ORTHO05D000378 1.7e-10 70.1 82 45.1
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-09 67.4 82 46.3
FvH4_6g15222 Fragaria vesca HOM05D000691 ORTHO05D000378 5.6e-09 65.1 103 39.8
FvH4_6g15223 Fragaria vesca HOM05D000691 ORTHO05D000378 5.6e-09 65.1 103 39.8
MELO3C032462.2 Cucumis melo HOM05D010785 ORTHO05D000378 1.6e-08 63.5 82 43.9
PGSC0003DMG400006418 Solanum tuberosum HOM05D000691 ORTHO05D000378 1.6e-08 63.5 79 41.8
Sopen07g008700 Solanum pennellii HOM05D000691 ORTHO05D000378 3.6e-08 62.4 79 41.8
PGSC0003DMG400020751 Solanum tuberosum HOM05D000691 ORTHO05D000378 4.8e-08 62.0 79 41.8
Thecc.05G106700 Theobroma cacao HOM05D000691 ORTHO05D000378 6.2e-08 61.6 79 43.0
PGSC0003DMG400029149 Solanum tuberosum HOM05D000691 ORTHO05D000378 1.1e-07 60.8 76 42.1
Sopen08g017020 Solanum pennellii HOM05D000691 ORTHO05D000378 1.8e-07 60.1 98 37.8
Sopen11g019970 Solanum pennellii HOM05D000691 ORTHO05D000378 2.4e-07 59.7 79 40.5
Sopen12g008510 Solanum pennellii HOM05D000691 ORTHO05D000378 5.3e-07 58.5 79 41.8
CSS0003516 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 6.9e-07 58.2 102 35.3
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 6.9e-07 58.2 92 34.8
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.0e-07 57.8 67 40.3
Sopen04g010320 Solanum pennellii HOM05D000691 ORTHO05D000378 1.2e-06 57.4 100 37.0
Sopen07g008430 Solanum pennellii HOM05D000004 ORTHO05D000378 1.5e-06 57.0 79 38.0
Oeu048360.1 Olea europaea HOM05D000691 ORTHO05D000378 2.0e-06 56.6 70 41.4
Manes.17G022547 Manihot esculenta HOM05D000691 ORTHO05D000378 2.6e-06 56.2 70 40.0
Sopen08g007820 Solanum pennellii HOM05D000691 ORTHO05D000378 2.6e-06 56.2 78 41.0
Sopen11g018110 Solanum pennellii HOM05D000691 ORTHO05D000378 2.6e-06 56.2 74 40.5
Oeu007084.1 Olea europaea HOM05D000691 ORTHO05D000378 3.4e-06 55.8 91 36.3
Oeu017935.1 Olea europaea HOM05D000691 ORTHO05D000378 3.4e-06 55.8 91 36.3
Sopen05g011350 Solanum pennellii HOM05D000004 ORTHO05D000378 3.4e-06 55.8 76 40.8
Sopen02g007390 Solanum pennellii HOM05D000691 ORTHO05D000378 4.5e-06 55.5 78 39.7
Oeu027530.1 Olea europaea HOM05D000691 ORTHO05D000378 5.8e-06 55.1 91 36.3
Oeu041244.1 Olea europaea HOM05D000691 ORTHO05D000378 5.8e-06 55.1 68 42.6
Oeu041682.1 Olea europaea HOM05D000691 ORTHO05D000378 5.8e-06 55.1 91 36.3
Oeu062087.1 Olea europaea HOM05D000691 ORTHO05D000378 5.8e-06 55.1 91 36.3
Oeu062537.1 Olea europaea HOM05D000691 ORTHO05D000378 5.8e-06 55.1 91 36.3
CSS0018551 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 7.6e-06 54.7 46 50.0
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 7.6e-06 54.7 45 57.8
Oeu016457.1 Olea europaea HOM05D000691 ORTHO05D000378 7.6e-06 54.7 91 35.2
Oeu032031.1 Olea europaea HOM05D000691 ORTHO05D000378 7.6e-06 54.7 103 36.9
Oeu046813.1 Olea europaea HOM05D000691 ORTHO05D000378 7.6e-06 54.7 91 35.2
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 7.6e-06 54.7 92 33.7
Sopen01g009890 Solanum pennellii HOM05D000004 ORTHO05D000378 7.6e-06 54.7 78 39.7
Sopen03g019760 Solanum pennellii HOM05D000004 ORTHO05D000378 7.6e-06 54.7 76 38.2
Oeu005833.1 Olea europaea HOM05D000691 ORTHO05D000378 9.9e-06 54.3 103 35.9


User provided reference genes

Program Settings