Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G009710 Cucumis sativus L. HOM05D004660 ORTHO05D005474 9.2e-83 310.1 146 100.0
MELO3C024844.2 Cucumis melo HOM05D004660 ORTHO05D005474 6.0e-82 307.4 146 98.6
ClCG07G009740 Citrullus lanatus HOM05D004660 ORTHO05D005474 2.8e-79 298.5 146 95.9
Sed0024142 Sechium edule HOM05D004660 ORTHO05D005474 1.5e-77 292.7 146 93.2
Sed0002848 Sechium edule HOM05D004660 ORTHO05D005474 4.1e-75 284.6 146 90.4
Thecc.03G211800 Theobroma cacao HOM05D004660 ORTHO05D005474 1.0e-65 253.4 147 79.6
Haze_00331 Corylus avellana HOM05D004660 ORTHO05D005474 1.3e-65 253.1 146 80.8
arahy.Tifrunner.gnm1.ann1.6FR5WN Arachis hypogaea HOM05D004660 ORTHO05D005474 2.3e-65 252.3 146 79.5
Cpa.g.sc3.184 Carica papaya HOM05D004660 ORTHO05D005474 2.3e-65 252.3 146 78.8
Duzib205G1429 Durio zibethinus HOM05D004660 ORTHO05D005474 6.6e-65 250.8 147 78.9
GSVIVG01038677001 Vitis vinifera HOM05D004660 ORTHO05D005474 8.7e-65 250.4 146 76.7
Lj1g0017846 Lotus japonicus HOM05D004660 ORTHO05D005474 1.5e-64 249.6 142 79.6
Glyma.06G138900 Glycine max HOM05D004660 ORTHO05D005474 1.9e-64 249.2 147 78.9
Phvul.008G188100 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 3.3e-64 248.4 146 77.4
Glyma.04G225900 Glycine max HOM05D004660 ORTHO05D005474 5.6e-64 247.7 147 77.6
VMungo0647G0407 Vigna mungo HOM05D004660 ORTHO05D005474 5.6e-64 247.7 146 76.7
FvH4_7g33300 Fragaria vesca HOM05D004660 ORTHO05D005474 7.3e-64 247.3 146 75.3
Lalb_Chr10g0102981 Lupinus albus HOM05D004660 ORTHO05D005474 7.3e-64 247.3 146 76.7
Glyma.14G188500 Glycine max HOM05D004660 ORTHO05D005474 9.6e-64 246.9 146 76.0
QL09p006015 Quercus lobata HOM05D004660 ORTHO05D005474 9.6e-64 246.9 146 78.8
LjContig00155g0012911 Lotus japonicus HOM05D004660 ORTHO05D005474 2.1e-63 245.7 146 75.3
Glyma.02G221000 Glycine max HOM05D004660 ORTHO05D005474 2.8e-63 245.4 146 76.0
VMungo1309G2317 Vigna mungo HOM05D004660 ORTHO05D005474 2.8e-63 245.4 148 77.0
Atru.chr12.2504 Acer truncatum HOM05D004660 ORTHO05D005474 3.6e-63 245.0 146 77.4
Atru.chr12.2527 Acer truncatum HOM05D004660 ORTHO05D005474 3.6e-63 245.0 146 77.4
Ciclev10022731m.g Citrus clementina HOM05D004660 ORTHO05D005474 4.8e-63 244.6 146 77.4
Hma1.2p1_0115F.1_g055760 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 4.8e-63 244.6 146 75.3
Ca_16837_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 6.2e-63 244.2 144 77.1
FAN10G1296 Fragaria x ananassa HOM05D004660 ORTHO05D005474 6.2e-63 244.2 146 74.0
FAN10G4080 Fragaria x ananassa HOM05D004660 ORTHO05D005474 6.2e-63 244.2 146 74.0
Gohir.D08G117700 Gossypium hirsutum HOM05D004660 ORTHO05D005474 6.2e-63 244.2 147 77.6
Gorai.004G126200 Gossypium raimondii HOM05D004660 ORTHO05D005474 6.2e-63 244.2 147 77.6
Phvul.009G040000 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 6.2e-63 244.2 148 77.0
CSS0012455 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 8.1e-63 243.8 146 75.3
Manes.05G195800 Manihot esculenta HOM05D004660 ORTHO05D005474 8.1e-63 243.8 146 77.4
Prupe.2G321900 Prunus persica HOM05D004660 ORTHO05D005474 8.1e-63 243.8 146 75.3
CANSAT21G0927 Cannabis sativa HOM05D004660 ORTHO05D005474 1.1e-62 243.4 150 79.3
Gohir.A08G106300 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.1e-62 243.4 147 78.2
vmacro10172 Vaccinium macrocarpon HOM05D004660 ORTHO05D005474 1.1e-62 243.4 146 76.0
FAN01G2536 Fragaria x ananassa HOM05D004660 ORTHO05D005474 1.4e-62 243.0 146 74.0
Potri.015G000900 Populus trichocarpa HOM05D004660 ORTHO05D005474 1.8e-62 242.7 148 77.7
TPR.G35910 Trifolium pratense HOM05D004660 ORTHO05D005474 1.8e-62 242.7 146 75.3
COL.COLO4_14397 Corchorus olitorius HOM05D004660 ORTHO05D005474 2.4e-62 242.3 140 78.6
LjContig00312_ERROPOS870357g0003416 Lotus japonicus HOM05D004660 ORTHO05D005474 5.3e-62 241.1 147 76.9
Nitab4.5_0007121g0060 Nicotiana tabacum HOM05D004660 ORTHO05D005474 5.3e-62 241.1 146 75.3
Rhsim09G0211000 Rhododendron simsii HOM05D004660 ORTHO05D005474 5.3e-62 241.1 146 74.7
RcHm_v2.0_Chr1g0383281 Rosa chinensis HOM05D004660 ORTHO05D005474 5.3e-62 241.1 147 73.5
CiPaw.05G208600 Carya illinoinensis HOM05D004660 ORTHO05D005474 6.9e-62 240.7 146 75.3
CiPaw.06G038500 Carya illinoinensis HOM05D004660 ORTHO05D005474 6.9e-62 240.7 147 75.5
Nitab4.5_0000021g0160 Nicotiana tabacum HOM05D004660 ORTHO05D005474 2.6e-61 238.8 146 74.0
CAN.G303.55 Capsicum annuum HOM05D004660 ORTHO05D005474 3.4e-61 238.4 146 75.3
Solyc03g079970.1 Solanum lycopersicum HOM05D004660 ORTHO05D005474 3.4e-61 238.4 146 73.3
Sopen03g021700 Solanum pennellii HOM05D004660 ORTHO05D005474 3.4e-61 238.4 146 73.3
PGSC0003DMG400000574 Solanum tuberosum HOM05D004660 ORTHO05D005474 3.4e-61 238.4 146 73.3
TAR629G0239 Trochodendron aralioides HOM05D004660 ORTHO05D005474 3.4e-61 238.4 146 74.7
FAN03G0846 Fragaria x ananassa HOM05D004660 ORTHO05D005474 4.5e-61 238.0 140 75.0
Aqoxy5G04391 Aquilegia oxysepala HOM05D004660 ORTHO05D005474 5.8e-61 237.7 148 75.0
Potri.012G004900 Populus trichocarpa HOM05D004660 ORTHO05D005474 7.6e-61 237.3 148 75.0
THA.LOC104803315 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 7.6e-61 237.3 147 76.2
MD01G1231200 Malus domestica HOM05D004660 ORTHO05D005474 1.3e-60 236.5 146 73.3
Psat2g060520 Pisum sativum HOM05D004660 ORTHO05D005474 1.3e-60 236.5 147 74.8
Psat7g096840 Pisum sativum HOM05D004660 ORTHO05D005474 1.3e-60 236.5 147 74.8
DCAR_020388 Daucus carota HOM05D004660 ORTHO05D005474 2.2e-60 235.7 146 74.0
Ca_05550_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 3.8e-60 235.0 146 74.0
DCAR_014568 Daucus carota HOM05D004660 ORTHO05D005474 8.4e-60 233.8 146 74.0
TPR.G27918 Trifolium pratense HOM05D004660 ORTHO05D005474 8.4e-60 233.8 148 75.0
THA.LOC104814957 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.4e-59 233.0 147 74.8
Lj1P1031T30 Lonicera japonica HOM05D004660 ORTHO05D005474 1.9e-59 232.6 150 72.0
Hma1.2p1_0415F.1_g148340 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 3.2e-59 231.9 148 71.6
MSTRG.26954 Avicennia marina HOM05D004660 ORTHO05D005474 5.4e-59 231.1 146 71.2
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 5.4e-59 231.1 144 72.2
Oeu055424.1 Olea europaea HOM05D004660 ORTHO05D005474 9.3e-59 230.3 146 71.2
Migut.F00125 Erythranthe guttata HOM05D004660 ORTHO05D005474 1.2e-58 229.9 146 71.2
Gohir.A12G244500 Gossypium hirsutum HOM05D004660 ORTHO05D005474 2.1e-58 229.2 133 78.2
Gohir.D12G245400 Gossypium hirsutum HOM05D004660 ORTHO05D005474 2.1e-58 229.2 133 78.2
Gorai.008G263000 Gossypium raimondii HOM05D004660 ORTHO05D005474 2.1e-58 229.2 133 78.2
TWI39G0024 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 2.7e-58 228.8 146 72.6
Thhalv10010801m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 4.6e-58 228.0 147 70.7
Psat5g071200 Pisum sativum HOM05D004660 ORTHO05D005474 4.6e-58 228.0 148 73.0
Aa31LG11G3870 Aethionema arabicum HOM05D004660 ORTHO05D005474 6.0e-58 227.6 146 71.9
Sc19g0000390 Simmondsia chinensis HOM05D004660 ORTHO05D005474 6.0e-58 227.6 146 69.9
TWI23G0412 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 1.0e-57 226.9 146 71.9
Medtr5g068660 Medicago truncatula HOM05D004660 ORTHO05D005474 1.3e-57 226.5 148 73.6
BcaB02g09594 Brassica carinata HOM05D004660 ORTHO05D005474 1.8e-57 226.1 146 70.5
arahy.Tifrunner.gnm1.ann1.N0NSHG Arachis hypogaea HOM05D004660 ORTHO05D005474 3.9e-57 224.9 132 78.0
Carub.0006s2247 Capsella rubella HOM05D004660 ORTHO05D005474 6.7e-57 224.2 149 71.1
SGA_v2.0_scaffold44G16872 Striga asiatica HOM05D004660 ORTHO05D005474 6.7e-57 224.2 147 68.7
CSS0035101 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 8.7e-57 223.8 146 69.9
Peaxi162Scf01026g00258 Petunia axillaris HOM05D004660 ORTHO05D005474 8.7e-57 223.8 137 73.7
SGA_v2.0_scaffold18G08494 Striga asiatica HOM05D004660 ORTHO05D005474 1.5e-56 223.0 143 67.8
Lj3P891T43 Lonicera japonica HOM05D004660 ORTHO05D005474 2.5e-56 222.2 146 69.9
Sp5g12560 Schrenkiella parvula HOM05D004660 ORTHO05D005474 2.5e-56 222.2 146 69.2
AL5G29390 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 3.3e-56 221.9 147 70.1
BraA06t25770Z Brassica rapa HOM05D004660 ORTHO05D005474 3.3e-56 221.9 146 69.2
A06p28270 Brassica napus HOM05D004660 ORTHO05D005474 5.6e-56 221.1 146 68.5
Thhalv10005081m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 1.6e-55 219.5 149 68.5
SalBow4G0874 Salvia bowleyana HOM05D004660 ORTHO05D005474 1.6e-55 219.5 146 67.8
Oeu061046.1 Olea europaea HOM05D004660 ORTHO05D005474 2.1e-55 219.2 146 68.5
AUR62005951 Chenopodium quinoa HOM05D004660 ORTHO05D005474 2.8e-55 218.8 146 65.1
AUR62028114 Chenopodium quinoa HOM05D004660 ORTHO05D005474 3.7e-55 218.4 146 65.1
Ah.13g071030 Amaranthus hybridus HOM05D004660 ORTHO05D005474 4.8e-55 218.0 146 66.4
Manes.01G050300 Manihot esculenta HOM05D004660 ORTHO05D005474 6.2e-55 217.6 125 79.2
Sp2g22770 Schrenkiella parvula HOM05D004660 ORTHO05D005474 8.1e-55 217.2 149 68.5
Migut.F00969 Erythranthe guttata HOM05D004660 ORTHO05D005474 1.1e-54 216.9 147 68.7
HanXRQChr01g0002691 Helianthus annuus HOM05D004660 ORTHO05D005474 1.1e-54 216.9 151 67.5
EL10Ac3g05134 Beta vulgaris HOM05D004660 ORTHO05D005474 1.8e-54 216.1 146 64.4
Ah.13g069080 Amaranthus hybridus HOM05D004660 ORTHO05D005474 2.4e-54 215.7 146 65.1
AL6G36220 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 9.0e-54 213.8 148 69.6
AT5G24610 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 1.2e-53 213.4 147 70.7
BcaNung01246 Brassica carinata HOM05D004660 ORTHO05D005474 1.5e-53 213.0 150 68.0
CARHR188840 Cardamine hirsuta HOM05D004660 ORTHO05D005474 5.8e-53 211.1 150 68.0
THA.LOC104799676 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.3e-52 209.9 147 68.0
ATR0579G143 Amborella trichopoda HOM05D004660 ORTHO05D005474 1.7e-52 209.5 147 65.3
A01p24630 Brassica napus HOM05D004660 ORTHO05D005474 1.7e-52 209.5 147 67.3
BraA01t02375Z Brassica rapa HOM05D004660 ORTHO05D005474 1.7e-52 209.5 147 67.3
BcaC09g49961 Brassica carinata HOM05D004660 ORTHO05D005474 2.2e-52 209.1 147 68.0
BolC1t03007H Brassica oleracea HOM05D004660 ORTHO05D005474 2.2e-52 209.1 147 68.0
A06p35410 Brassica napus HOM05D004660 ORTHO05D005474 8.4e-52 207.2 150 66.0
BraA06t26464Z Brassica rapa HOM05D004660 ORTHO05D005474 8.4e-52 207.2 150 66.0
AT3G49550 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 2.4e-51 205.7 150 66.7
C03p65490 Brassica napus HOM05D004660 ORTHO05D005474 5.5e-51 204.5 131 67.2
Carub.0005s1588 Capsella rubella HOM05D004660 ORTHO05D005474 5.5e-51 204.5 135 69.6
Zm00001eb220600 Zea mays HOM05D004660 ORTHO05D005474 7.1e-51 204.1 146 65.8
arahy.Tifrunner.gnm1.ann1.0Y4BRG Arachis hypogaea HOM05D004660 ORTHO05D005474 9.3e-51 203.8 130 74.6
CARHR158560 Cardamine hirsuta HOM05D004660 ORTHO05D005474 2.1e-50 202.6 151 63.6
BcaC03g17953 Brassica carinata HOM05D004660 ORTHO05D005474 2.7e-50 202.2 150 66.0
C02p60130 Brassica napus HOM05D004660 ORTHO05D005474 2.7e-50 202.2 150 66.0
BolC2t12069H Brassica oleracea HOM05D004660 ORTHO05D005474 2.7e-50 202.2 150 66.0
A02p40180 Brassica napus HOM05D004660 ORTHO05D005474 3.5e-50 201.8 150 66.0
BraA02t08983Z Brassica rapa HOM05D004660 ORTHO05D005474 1.8e-49 199.5 150 65.3
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 2.3e-49 199.1 123 70.7
CSS0045456 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 3.9e-49 198.4 113 75.2
BcaB07g29917 Brassica carinata HOM05D004660 ORTHO05D005474 1.5e-48 196.4 150 65.3
BcaNung02008 Brassica carinata HOM05D004660 ORTHO05D005474 2.5e-48 195.7 148 64.9
C07p43100 Brassica napus HOM05D004660 ORTHO05D005474 2.5e-48 195.7 148 64.9
BolC7t44836H Brassica oleracea HOM05D004660 ORTHO05D005474 2.5e-48 195.7 148 64.9
unitig_92.g28236 Utricularia gibba HOM05D004660 ORTHO05D005474 7.4e-48 194.1 146 56.8
Lsat_1_v5_gn_6_117240 Lactuca sativa HOM05D004660 ORTHO05D005474 4.8e-47 191.4 150 60.7
Os10g0509100 Oryza sativa ssp. japonica HOM05D004660 ORTHO05D005474 4.8e-47 191.4 146 63.0
Nn3g18745 Nelumbo nucifera HOM05D004660 ORTHO05D005474 1.4e-46 189.9 134 66.4
unitig_37.g11998 Utricularia gibba HOM05D004660 ORTHO05D005474 1.2e-45 186.8 146 56.2
Zm00001eb043850 Zea mays HOM05D004660 ORTHO05D005474 3.4e-45 185.3 146 61.0
MD07G1303200 Malus domestica HOM05D004660 ORTHO05D005474 4.3e-40 168.3 101 77.2
Cc02_g00620 Coffea canephora HOM05D004660 ORTHO05D005474 2.8e-39 165.6 146 56.8
Medtr3g093320 Medicago truncatula HOM05D004660 ORTHO05D005474 3.7e-39 165.2 146 61.0
CSS0032658 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 1.8e-38 162.9 146 57.5
BcaC01g02416 Brassica carinata HOM05D004660 ORTHO05D005474 1.9e-35 152.9 101 66.3
SalBow2G1279 Salvia bowleyana HOM05D004660 ORTHO05D005474 4.6e-34 148.3 96 72.9
SEGI_20417 Sequoiadendron giganteum HOM05D004660 ORTHO05D005474 1.0e-33 147.1 148 51.4
Mapoly0204s0014 Marchantia polymorpha HOM05D004660 ORTHO05D005474 2.8e-31 139.0 122 54.1
SMO351G0342 Selaginella moellendorffii HOM05D004660 ORTHO05D005474 1.2e-26 123.6 166 43.4
Aa31LG4G18040 Aethionema arabicum HOM05D004660 ORTHO05D005474 6.3e-23 111.3 127 50.4
AagrBONN_evm.TU.Sc2ySwM_117.1216 Anthoceros agrestis HOM05D004660 ORTHO05D005474 4.5e-21 105.1 103 47.6
Actinidia08719 Actinidia chinensis HOM05D004660 ORTHO05D005474 6.5e-20 101.3 67 68.7
DCAR_001793 Daucus carota HOM05D000001 ORTHO05D000003 3.6e-18 95.5 75 64.0
Cre07.g345800 Chlamydomonas reinhardtii HOM05D004660 ORTHO05D005474 1.4e-09 67.0 91 35.2
arahy.Tifrunner.gnm1.ann1.RHW5C7 Arachis hypogaea HOM05D017329 ORTHO05D005474 1.2e-08 63.9 37 73.0
PRCOL_00007052 Prasinoderma coloniale HOM05D004660 ORTHO05D005474 4.8e-07 58.5 76 32.9


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