Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.5e-45 184.5 87 100.0
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-35 152.9 87 78.2
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.7e-31 137.9 79 78.5
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-29 132.1 72 81.9
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.8e-26 121.7 84 63.1
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.3e-25 118.6 84 60.7
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.5e-24 113.6 84 53.6
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 7.5e-24 113.6 67 77.6
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.9e-24 113.2 84 52.4
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.9e-23 110.9 84 51.2
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.4e-23 110.5 84 54.8
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 5.4e-22 107.5 84 54.8
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-21 106.3 84 52.4
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.5e-21 104.8 83 53.0
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 6.0e-21 104.0 84 52.4
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.8e-21 103.6 84 52.4
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.8e-21 103.6 84 51.2
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-20 103.2 58 79.3
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 2.3e-20 102.1 84 52.4
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 3.9e-20 101.3 84 53.6
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 6.6e-20 100.5 80 51.2
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 6.6e-20 100.5 84 53.6
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 8.6e-20 100.1 84 52.4
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-19 99.0 74 54.1
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-19 99.0 53 81.1
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.5e-19 96.7 77 54.5
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-18 96.3 84 51.2
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 1.2e-18 96.3 84 52.4
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.2e-18 94.0 74 55.4
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.1e-18 93.6 73 54.8
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.8e-17 92.4 64 60.9
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.1e-17 91.7 74 52.7
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 1.7e-15 85.9 77 49.4
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.9e-15 85.1 58 62.1
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 3.8e-15 84.7 80 47.5
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 1.9e-14 82.4 80 47.5
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.2e-14 81.3 57 57.9
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 4.2e-14 81.3 61 57.4
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-13 79.0 51 60.8
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 1.0e-12 76.6 76 50.0
MELO3C032453.2 Cucumis melo HOM05D007314 ORTHO05D034924 1.0e-12 76.6 45 80.0
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-12 76.3 37 89.2
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 2.3e-12 75.5 71 46.5
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 5.1e-12 74.3 77 40.3
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 6.6e-12 73.9 76 39.5
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.7e-12 73.6 57 56.1
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 1.9e-11 72.4 74 43.2
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-11 72.4 48 60.4
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 7.3e-11 70.5 74 41.9
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 1.1e-09 66.6 79 44.3
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-09 66.6 48 58.3
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-09 64.7 46 54.3
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 5.3e-09 64.3 72 43.1
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 6.9e-09 63.9 72 41.7
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.2e-08 63.2 72 38.9
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.5e-08 62.8 72 41.7
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.4e-08 61.2 72 40.3
MELO3C032661.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.9e-08 60.1 41 58.5
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 1.7e-07 59.3 71 36.6
MELO3C034314.2 Cucumis melo HOM05D007314 ORTHO05D167746 2.9e-07 58.5 34 70.6
BolC3t20566H Brassica oleracea HOM05D007314 ORTHO05D003768 4.9e-07 57.8 68 30.9
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-06 56.6 71 36.6
RcHm_v2.0_Chr7g0177401 Rosa chinensis HOM05D007314 ORTHO05D003768 3.2e-06 55.1 47 46.8
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 4.2e-06 54.7 80 28.8
PSO210G2358 Papaver somniferum HOM05D008526 ORTHO05D010380 9.3e-06 53.5 74 32.4


User provided reference genes

Program Settings