Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 2.7e-189 665.2 351 100.0
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 3.1e-169 598.6 347 89.3
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 6.2e-117 424.9 347 67.7
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 9.9e-99 364.4 380 57.1
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 6.5e-58 228.8 324 46.9
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 3.0e-55 219.9 343 43.4
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 2.4e-52 210.3 346 40.2
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 5.3e-52 209.1 343 42.0
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 2.0e-51 207.2 336 41.4
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 7.7e-51 205.3 350 40.3
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 1.9e-49 200.7 347 40.6
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 7.2e-49 198.7 340 39.4
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 3.6e-48 196.4 335 41.8
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 3.6e-48 196.4 350 40.9
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 3.0e-47 193.4 345 38.8
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 4.0e-47 193.0 341 39.3
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 4.0e-47 193.0 328 40.5
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 1.1e-46 191.4 343 39.4
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 4.4e-46 189.5 359 39.6
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 9.7e-46 188.3 322 39.8
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.7e-45 187.6 351 37.6
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.7e-45 187.6 336 39.0
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 1.7e-45 187.6 359 39.3
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 2.2e-45 187.2 347 38.6
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 2.2e-45 187.2 336 37.8
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 2.8e-45 186.8 349 38.4
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 6.3e-45 185.7 356 42.1
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 1.1e-44 184.9 363 38.8
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 1.8e-44 184.1 388 36.6
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 3.1e-44 183.3 355 38.3
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 5.3e-44 182.6 351 39.9
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 9.1e-44 181.8 341 38.1
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 9.1e-44 181.8 349 39.8
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 5.9e-43 179.1 322 38.5
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 7.7e-43 178.7 327 38.5
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 3.8e-42 176.4 374 36.1
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 6.5e-42 175.6 335 39.4
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 6.5e-42 175.6 355 37.5
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 8.5e-42 175.3 357 39.2
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 1.1e-41 174.9 335 36.7
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 1.5e-41 174.5 350 36.0
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 1.9e-41 174.1 317 38.8
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 2.5e-41 173.7 317 38.8
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 3.2e-41 173.3 317 39.1
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 3.2e-41 173.3 332 37.0
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 4.2e-41 172.9 334 38.3
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 4.2e-41 172.9 353 40.5
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 5.5e-41 172.6 354 38.4
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 7.2e-41 172.2 335 36.1
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 1.2e-40 171.4 342 40.9
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 1.2e-40 171.4 334 38.0
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 1.6e-40 171.0 346 38.4
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 2.1e-40 170.6 350 36.9
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 6.1e-40 169.1 339 37.2
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 6.1e-40 169.1 328 37.2
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 8.0e-40 168.7 327 38.5
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 1.8e-39 167.5 391 35.0
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 2.3e-39 167.2 339 36.9
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 2.3e-39 167.2 332 37.0
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 2.3e-39 167.2 328 35.7
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 3.0e-39 166.8 337 38.3
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 3.0e-39 166.8 347 35.2
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 4.0e-39 166.4 325 35.1
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 8.8e-39 165.2 365 34.5
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 1.2e-38 164.9 332 37.7
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 9.8e-38 161.8 324 36.4
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 9.8e-38 161.8 379 36.7
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.2e-37 160.6 324 38.0
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 2.2e-37 160.6 155 52.9
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 3.7e-37 159.8 392 33.2
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 4.8e-37 159.5 332 36.4
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 4.8e-37 159.5 330 38.2
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 4.8e-37 159.5 175 50.3
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 4.8e-37 159.5 354 36.7
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 1.1e-36 158.3 297 36.7
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.8e-36 157.5 159 52.2
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.8e-36 157.5 159 52.2
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 4.1e-36 156.4 133 57.9
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 5.4e-36 156.0 355 37.2
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 9.1e-36 155.2 279 37.6
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 1.2e-35 154.8 341 34.0
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 1.6e-35 154.5 324 37.7
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 2.0e-35 154.1 348 36.5
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 2.0e-35 154.1 356 34.3
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 2.0e-35 154.1 178 50.0
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 3.5e-35 153.3 326 35.0
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 5.9e-35 152.5 342 36.0
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 5.9e-35 152.5 340 32.1
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 7.7e-35 152.1 356 35.1
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 1.0e-34 151.8 325 36.0
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 1.0e-34 151.8 229 41.0
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.7e-34 151.0 380 36.3
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 2.2e-34 150.6 178 48.9
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 2.9e-34 150.2 348 36.5
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 6.5e-34 149.1 344 36.6
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 1.1e-33 148.3 348 34.8
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.1e-33 148.3 378 34.4
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 7.2e-33 145.6 150 54.0
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 1.6e-32 144.4 338 32.5
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 3.6e-32 143.3 341 35.2
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 6.1e-32 142.5 335 34.3
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 6.1e-32 142.5 350 35.4
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 1.8e-31 141.0 346 32.7
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 6.8e-31 139.0 348 37.6
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 6.8e-31 139.0 334 31.7
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 8.8e-31 138.7 149 48.3
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 1.5e-30 137.9 335 31.3
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 1.5e-30 137.9 334 34.7
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 3.1e-28 130.2 400 31.8
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 4.1e-28 129.8 288 34.4
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 1.6e-27 127.9 305 35.1
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 2.7e-27 127.1 116 56.9
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 5.9e-27 125.9 305 35.4
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 7.7e-27 125.6 329 32.2
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 1.7e-26 124.4 267 36.0
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 2.9e-26 123.6 115 53.0
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 2.9e-26 123.6 153 47.7
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 3.8e-26 123.2 146 46.6
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 5.0e-26 122.9 115 53.9
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 6.6e-26 122.5 112 55.4
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 6.6e-26 122.5 213 36.2
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 8.6e-26 122.1 255 36.1
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 2.5e-25 120.6 307 33.9
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 2.5e-25 120.6 165 44.2
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 5.6e-25 119.4 308 32.1
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 5.6e-25 119.4 308 32.1
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 7.2e-25 119.0 262 34.7
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 1.2e-24 118.2 154 41.6
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 2.8e-24 117.1 99 58.6
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 4.7e-24 116.3 153 45.8
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 8.0e-24 115.5 287 34.8
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 1.0e-23 115.2 335 31.3
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 1.4e-23 114.8 307 33.6
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 5.2e-23 112.8 306 33.7
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 5.2e-23 112.8 306 33.7
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 3.4e-22 110.2 396 26.8
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 3.4e-22 110.2 326 30.7
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 5.7e-22 109.4 308 33.4
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 9.8e-22 108.6 315 34.0
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.4e-20 104.8 121 47.9
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 1.4e-20 104.8 353 27.2
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 2.7e-19 100.5 375 28.0
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 2.7e-19 100.5 307 31.3
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 3.5e-19 100.1 334 29.6
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 5.9e-19 99.4 250 31.6
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 4.3e-17 93.2 154 39.0
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.2e-16 91.7 90 51.1
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 6.2e-16 89.4 233 35.6
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 7.5e-14 82.4 221 35.7
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 9.8e-14 82.0 99 49.5
Os01g0531000 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 9.2e-12 75.5 319 26.6
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 1.2e-11 75.1 106 41.5
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 7.8e-11 72.4 251 29.1
FvH4_4g24221 Fragaria vesca HOM05D004296 ORTHO05D005045 2.3e-10 70.9 95 46.3
Oeu009158.1 Olea europaea HOM05D004296 ORTHO05D005045 1.9e-09 67.8 129 34.1
Cfa014102 Carpinus fangiana HOM05D004296 ORTHO05D005045 4.7e-08 63.2 52 55.8
Mapoly0057s0052 Marchantia polymorpha HOM05D004296 ORTHO05D005045 1.4e-07 61.6 98 41.8
arahy.Tifrunner.gnm1.ann1.BHE6V7 Arachis hypogaea HOM05D004296 ORTHO05D005045 3.4e-06 57.0 69 42.0


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