Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G005610 Cucumis sativus L. HOM05D015520 ORTHO05D010445 3.0e-87 325.5 208 100.0
MELO3C016387.2 Cucumis melo HOM05D015520 ORTHO05D010445 6.0e-51 204.9 208 71.6
ClCG07G008530 Citrullus lanatus HOM05D015520 ORTHO05D010445 1.4e-39 167.2 213 62.0
MELO3C016385.2 Cucumis melo HOM05D015520 ORTHO05D010445 9.5e-33 144.4 101 76.2
Sed0013344 Sechium edule HOM05D015520 ORTHO05D010445 2.3e-26 123.2 206 43.2
Sed0008948 Sechium edule HOM05D015520 ORTHO05D010445 4.3e-17 92.4 179 37.4
CsaV3_4G005630 Cucumis sativus L. HOM05D015520 ORTHO05D010445 1.5e-14 84.0 103 52.4
Dinv13520 Davidia involucrata HOM05D009163 ORTHO05D010445 1.5e-14 84.0 181 33.7
Actinidia19192 Actinidia chinensis HOM05D009163 ORTHO05D010445 1.3e-13 80.9 110 40.9
vmacro17825 Vaccinium macrocarpon HOM05D009163 ORTHO05D010445 2.9e-13 79.7 184 40.8
CiPaw.11G175700 Carya illinoinensis HOM05D009163 ORTHO05D010445 2.4e-12 76.6 172 32.0
MELO3C016388.2 Cucumis melo HOM05D015520 ORTHO05D010445 1.2e-11 74.3 57 75.4
CiPaw.01G040400 Carya illinoinensis HOM05D009163 ORTHO05D010445 3.5e-11 72.8 113 39.8
Rhsim08G0118300 Rhododendron simsii HOM05D009163 ORTHO05D010445 4.6e-11 72.4 107 35.5
RhsimUnG0100100 Rhododendron simsii HOM05D009163 ORTHO05D010445 4.6e-11 72.4 107 35.5
Lsat_1_v5_gn_4_152361 Lactuca sativa HOM05D038519 ORTHO05D010445 3.9e-10 69.3 110 36.4
GSVIVG01018946001 Vitis vinifera HOM05D009163 ORTHO05D010445 1.3e-08 64.3 104 38.5
MD02G1146200 Malus domestica HOM05D028013 ORTHO05D010445 4.8e-08 62.4 179 29.6
CSS0029219 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 6.2e-08 62.0 51 52.9
Sabra05G0100500 Salix brachista HOM05D009163 ORTHO05D010445 1.4e-07 60.8 112 33.9
HanXRQChr09g0274571 Helianthus annuus HOM05D038519 ORTHO05D010445 2.4e-07 60.1 111 33.3
AT4G36600 Arabidopsis thaliana HOM05D009606 ORTHO05D011759 4.0e-07 59.3 102 41.2
ECA232G0274 Erigeron canadensis HOM05D038519 ORTHO05D010445 3.4e-06 56.2 87 35.6
QL06p046412 Quercus lobata HOM05D009163 ORTHO05D010445 3.4e-06 56.2 111 30.6
Prupe.7G155800 Prunus persica HOM05D028013 ORTHO05D010445 4.5e-06 55.8 70 41.4
MSTRG.15269 Avicennia marina HOM05D009163 ORTHO05D010445 5.8e-06 55.5 95 34.7
Prupe.I002400 Prunus persica HOM05D028013 ORTHO05D010445 9.9e-06 54.7 67 41.8


User provided reference genes

Program Settings