Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 7.6e-283 976.5 485 100.0
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.7e-253 879.0 487 89.5
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 2.8e-224 781.9 393 98.2
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 2.6e-222 775.4 465 80.6
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 3.4e-222 775.0 463 82.3
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 7.5e-222 773.9 467 82.0
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 1.8e-220 769.2 465 80.0
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.8e-220 769.2 464 80.4
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 2.4e-220 768.8 464 80.0
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 4.1e-220 768.1 465 79.1
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 2.7e-219 765.4 469 78.9
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 4.5e-219 764.6 467 81.2
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 2.3e-218 762.3 465 79.6
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 1.9e-217 759.2 470 76.8
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.5e-217 758.8 465 79.6
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.6e-216 756.1 467 77.1
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 3.6e-216 755.0 470 76.2
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 6.1e-216 754.2 461 80.0
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.8e-215 752.7 469 78.5
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 6.8e-215 750.7 465 77.8
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 8.9e-215 750.4 471 76.9
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 8.9e-215 750.4 466 77.3
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.2e-214 750.0 475 77.1
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 4.4e-214 748.0 464 78.0
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 7.5e-214 747.3 475 76.2
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.7e-213 746.1 464 77.2
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 8.3e-213 743.8 497 72.8
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.8e-212 742.7 471 76.0
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 2.4e-212 742.3 463 78.0
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 3.2e-212 741.9 466 76.2
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 5.4e-212 741.1 463 77.5
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.2e-211 740.0 497 72.2
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 1.2e-211 740.0 489 75.1
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 1.0e-210 736.9 462 77.1
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.3e-210 736.5 474 75.3
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.3e-210 735.7 500 71.8
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 1.5e-209 733.0 482 73.7
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 2.5e-209 732.3 463 76.5
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 3.3e-209 731.9 468 74.4
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 3.3e-209 731.9 474 74.7
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 4.3e-209 731.5 465 76.3
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 4.7e-208 728.0 505 71.1
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 4.7e-208 728.0 499 72.7
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.8e-207 726.1 461 76.1
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 2.3e-207 725.7 474 74.5
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 3.1e-207 725.3 464 76.3
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 5.2e-207 724.5 463 75.2
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 1.2e-206 723.4 477 71.9
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 1.7e-205 719.5 475 74.1
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 7.0e-204 714.1 495 71.9
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.2e-203 713.4 555 69.5
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.1e-199 700.3 461 72.7
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 4.0e-199 698.4 558 64.9
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 7.8e-195 684.1 461 70.3
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 6.6e-194 681.0 466 71.7
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 3.6e-192 675.2 547 62.7
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.1e-191 673.7 499 64.5
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.1e-187 659.4 474 69.4
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 8.6e-186 654.1 462 65.8
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 5.6e-185 651.4 402 77.9
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.8e-184 649.0 476 67.4
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.2e-182 643.7 404 75.2
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.6e-182 642.5 477 66.9
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 9.9e-182 640.6 398 76.9
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 9.9e-182 640.6 398 76.9
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 4.9e-181 638.3 459 64.5
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 6.4e-181 637.9 382 80.1
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 7.8e-179 630.9 462 64.9
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 6.6e-178 627.9 463 66.1
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 1.3e-176 623.6 464 66.4
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.8e-175 619.8 417 71.9
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.0e-170 604.0 464 63.8
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 4.8e-168 595.1 424 68.4
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 2.0e-166 589.7 365 79.2
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 4.9e-165 585.1 469 63.5
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.8e-162 576.6 474 61.6
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 4.5e-158 562.0 324 83.0
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 7.6e-150 534.6 368 70.7
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 7.2e-148 528.1 333 76.0
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.2e-142 510.8 373 71.0
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 9.1e-119 431.4 274 74.8
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 9.5e-108 394.8 235 80.9
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 7.6e-73 278.9 171 80.1
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 8.1e-67 258.8 431 32.9
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 9.3e-63 245.4 153 76.5
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 9.9e-57 225.3 235 55.7
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.4e-50 204.9 159 66.7
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.6e-44 183.0 119 71.4
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 2.8e-27 127.5 374 28.1
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 4.7e-22 110.2 77 66.2
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 2.0e-20 104.8 392 25.5
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 1.5e-17 95.1 383 24.8
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 1.1e-15 89.0 58 70.7
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 6.1e-14 83.2 342 24.9
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 1.5e-12 78.6 477 22.4
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 1.8e-10 71.6 52 63.5


User provided reference genes

Program Settings