Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 5.8e-98 360.9 185 100.0
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 1.2e-79 300.1 163 93.9
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 6.0e-63 244.6 163 78.5
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 1.2e-55 220.3 167 67.1
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 1.3e-54 216.9 165 67.3
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 8.7e-54 214.2 164 65.9
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 1.1e-53 213.8 163 66.3
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.5e-53 212.6 165 67.3
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 2.1e-52 209.5 168 64.3
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 5.9e-50 201.4 163 61.3
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 1.1e-48 197.2 165 60.6
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 5.5e-48 194.9 169 62.1
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 1.2e-47 193.7 163 61.3
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.2e-47 193.7 163 61.3
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 1.6e-47 193.4 163 68.1
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 2.1e-47 193.0 163 61.3
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 4.6e-47 191.8 169 59.8
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 7.9e-47 191.0 166 59.0
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 1.0e-46 190.7 161 62.7
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 1.8e-46 189.9 176 55.1
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 4.3e-45 185.3 160 60.6
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 5.7e-45 184.9 167 58.7
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 1.6e-44 183.3 165 57.0
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 2.2e-44 183.0 165 55.8
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 1.4e-43 180.3 165 54.5
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 4.1e-43 178.7 169 58.6
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 4.1e-43 178.7 169 58.6
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 9.1e-43 177.6 169 57.4
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 3.4e-42 175.6 164 55.5
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 3.4e-42 175.6 164 56.7
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 3.4e-42 175.6 169 55.6
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 5.9e-42 174.9 170 57.6
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 5.9e-42 174.9 169 55.6
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 2.2e-41 172.9 166 54.8
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 5.0e-41 171.8 166 54.2
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 8.5e-41 171.0 163 56.4
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 8.5e-41 171.0 171 55.6
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 1.1e-40 170.6 164 56.1
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 1.1e-40 170.6 163 55.8
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 1.9e-40 169.9 165 55.8
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 1.9e-40 169.9 163 55.8
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 3.2e-40 169.1 161 55.3
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 5.5e-40 168.3 165 55.2
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 9.4e-40 167.5 165 54.5
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.2e-39 167.2 166 52.4
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 1.6e-39 166.8 163 54.6
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 7.9e-39 164.5 164 54.9
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 1.4e-38 163.7 167 52.7
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 3.9e-38 162.2 171 51.5
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 3.9e-38 162.2 164 51.8
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 5.1e-38 161.8 162 52.5
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 8.8e-38 161.0 165 52.1
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 1.1e-37 160.6 168 53.0
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 3.3e-37 159.1 166 51.8
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 3.3e-37 159.1 170 52.4
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 5.7e-37 158.3 165 52.1
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 9.7e-37 157.5 163 53.4
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 9.7e-37 157.5 163 53.4
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.3e-36 157.1 163 54.0
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 1.3e-36 157.1 165 52.1
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 2.2e-36 156.4 165 51.5
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 2.8e-36 156.0 163 52.1
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 2.8e-36 156.0 167 47.9
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 4.8e-36 155.2 163 52.8
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 4.8e-36 155.2 163 52.8
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 4.8e-36 155.2 163 52.8
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 4.8e-36 155.2 163 52.8
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 1.1e-35 154.1 172 50.0
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 4.1e-35 152.1 166 50.6
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 4.5e-34 148.7 163 48.5
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 2.2e-33 146.4 163 47.2
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 5.0e-33 145.2 152 53.3
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 1.1e-32 144.1 170 47.1
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 1.9e-32 143.3 152 52.6
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 3.6e-31 139.0 166 46.4
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 4.7e-31 138.7 164 47.6
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 1.8e-30 136.7 163 50.9
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 8.8e-30 134.4 163 45.4
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 3.7e-28 129.0 164 47.0
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 4.8e-28 128.6 140 51.4
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 1.1e-27 127.5 164 45.7
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 4.1e-27 125.6 163 44.2
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 7.0e-27 124.8 162 44.4
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 7.0e-27 124.8 122 52.5
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 3.8e-25 119.0 143 46.2
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.5e-24 117.1 163 43.6
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 4.2e-24 115.5 163 44.8
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 1.6e-23 113.6 164 42.1
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 2.7e-23 112.8 163 43.6
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 2.7e-23 112.8 141 43.3
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 8.0e-23 111.3 163 41.7
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.3e-22 109.8 140 45.7
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 8.8e-22 107.8 164 40.9
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 9.1e-19 97.8 148 40.5
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 4.5e-18 95.5 130 44.6
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 2.5e-16 89.7 134 37.3
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 3.4e-13 79.3 100 42.0
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 1.3e-09 67.4 96 40.6
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 2.3e-09 66.6 115 38.3
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 5.0e-09 65.5 136 30.1
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 6.5e-09 65.1 137 29.9
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 2.3e-06 56.6 76 42.1


User provided reference genes

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