Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G002390 Cucumis sativus L. HOM05D003399 ORTHO05D003393 7.6e-128 460.7 262 100.0
MELO3C017803.2 Cucumis melo HOM05D003399 ORTHO05D003393 1.1e-105 387.1 247 83.0
ClCG07G011810 Citrullus lanatus HOM05D003399 ORTHO05D003393 9.1e-89 330.9 257 74.7
Sed0004087 Sechium edule HOM05D003399 ORTHO05D003393 9.5e-54 214.5 210 63.8
Manes.08G102600 Manihot esculenta HOM05D003399 ORTHO05D003393 4.3e-22 109.4 224 41.5
Manes.09G186300 Manihot esculenta HOM05D003399 ORTHO05D003393 1.1e-20 104.8 226 39.8
Haze_12480 Corylus avellana HOM05D003399 ORTHO05D003393 7.6e-19 98.6 222 41.0
Cfa009429 Carpinus fangiana HOM05D003399 ORTHO05D003393 9.9e-19 98.2 221 40.3
Thecc.02G195400 Theobroma cacao HOM05D003399 ORTHO05D003393 1.7e-18 97.4 209 39.7
MSTRG.465 Avicennia marina HOM05D003399 ORTHO05D003393 1.9e-17 94.0 220 39.1
Potri.003G164800 Populus trichocarpa HOM05D003399 ORTHO05D003393 2.4e-17 93.6 235 37.0
Potri.001G062700 Populus trichocarpa HOM05D003399 ORTHO05D003393 7.1e-17 92.0 238 37.0
Sabra03G0119900 Salix brachista HOM05D003399 ORTHO05D003393 7.1e-17 92.0 232 38.8
Duzib132G1194 Durio zibethinus HOM05D003399 ORTHO05D003393 9.3e-17 91.7 208 38.9
CiPaw.06G108000 Carya illinoinensis HOM05D003399 ORTHO05D003393 2.7e-16 90.1 227 39.2
Duzib248G1620 Durio zibethinus HOM05D003399 ORTHO05D003393 1.7e-15 87.4 206 39.8
QL03p050027 Quercus lobata HOM05D003399 ORTHO05D003393 1.5e-14 84.3 218 37.2
Duzib052G0315 Durio zibethinus HOM05D003399 ORTHO05D003393 4.3e-14 82.8 208 36.5
COL.COLO4_07618 Corchorus olitorius HOM05D003399 ORTHO05D003393 5.6e-14 82.4 211 35.1
CiPaw.05G103400 Carya illinoinensis HOM05D003399 ORTHO05D003393 3.6e-13 79.7 209 37.3
TAR622G1322 Trochodendron aralioides HOM05D003399 ORTHO05D003393 6.2e-13 79.0 200 36.5
Oeu019432.1 Olea europaea HOM05D003399 ORTHO05D003393 1.1e-12 78.2 224 35.7
Prupe.1G218100 Prunus persica HOM05D003399 ORTHO05D003393 1.1e-12 78.2 232 35.3
Aqoxy3G01823 Aquilegia oxysepala HOM05D003399 ORTHO05D003393 1.4e-12 77.8 223 35.0
CSS0040305 Camellia sinensis var. sinensis HOM05D003399 ORTHO05D006018 2.4e-12 77.0 198 40.4
Eucgr.G01956 Eucalyptus grandis HOM05D003399 ORTHO05D003393 4.0e-12 76.3 220 35.9
Gohir.D12G144800 Gossypium hirsutum HOM05D003399 ORTHO05D003393 1.2e-11 74.7 207 33.8
TAR374G0208 Trochodendron aralioides HOM05D003399 ORTHO05D003393 1.2e-11 74.7 207 37.2
Gohir.A12G140200 Gossypium hirsutum HOM05D003399 ORTHO05D003393 1.5e-11 74.3 206 34.5
RcHm_v2.0_Chr4g0429231 Rosa chinensis HOM05D003399 ORTHO05D003393 1.5e-11 74.3 244 34.0
TAR629G1336 Trochodendron aralioides HOM05D003399 ORTHO05D003393 2.0e-11 73.9 218 32.6
Gohir.A04G101200 Gossypium hirsutum HOM05D003399 ORTHO05D003393 1.1e-09 68.2 205 34.1
Oeu003275.1 Olea europaea HOM05D003399 ORTHO05D003393 1.1e-09 68.2 225 32.0
Ciclev10033818m.g Citrus clementina HOM05D003399 ORTHO05D003393 1.4e-09 67.8 237 32.9
PGR119G0713 Punica granatum HOM05D003399 ORTHO05D003393 1.9e-09 67.4 207 34.8
TWI36G0503 Tripterygium wilfordii HOM05D003399 ORTHO05D003393 1.9e-09 67.4 189 36.0
Gorai.008G156200 Gossypium raimondii HOM05D003399 ORTHO05D003393 4.2e-09 66.2 204 31.4
Oeu044505.1 Olea europaea HOM05D003399 ORTHO05D003393 4.2e-09 66.2 214 35.0
Actinidia30598 Actinidia chinensis HOM05D003399 ORTHO05D003393 9.3e-09 65.1 206 35.9
Rhsim12G0018700 Rhododendron simsii HOM05D003399 ORTHO05D003393 9.3e-09 65.1 215 32.6
Actinidia22126 Actinidia chinensis HOM05D003399 ORTHO05D003393 1.2e-08 64.7 216 34.3
ClCG06G001790 Citrullus lanatus HOM05D003399 ORTHO05D003393 1.6e-08 64.3 206 32.5
Gohir.D04G140300 Gossypium hirsutum HOM05D003399 ORTHO05D003393 1.6e-08 64.3 207 35.3
Lalb_Chr04g0258081 Lupinus albus HOM05D003399 ORTHO05D003393 1.6e-08 64.3 244 29.9
GSVIVG01000970001 Vitis vinifera HOM05D003399 ORTHO05D003393 2.1e-08 63.9 210 33.8
Migut.K01039 Erythranthe guttata HOM05D003399 ORTHO05D003393 4.6e-08 62.8 193 31.6
Oeu055475.1 Olea europaea HOM05D003399 ORTHO05D003393 6.0e-08 62.4 223 29.6
Gorai.012G125300 Gossypium raimondii HOM05D003399 ORTHO05D003393 1.7e-07 60.8 206 32.5
Cpa.g.sc207.7 Carica papaya HOM05D003399 ORTHO05D003393 2.3e-07 60.5 234 30.8
MD16G1128300 Malus domestica HOM05D003399 ORTHO05D003393 3.0e-07 60.1 253 32.8
TWI75G1177 Tripterygium wilfordii HOM05D003399 ORTHO05D003393 5.1e-07 59.3 184 32.6
Dinv12132 Davidia involucrata HOM05D003399 ORTHO05D003393 1.1e-06 58.2 229 32.3
MD13G1127900 Malus domestica HOM05D003399 ORTHO05D003393 1.1e-06 58.2 233 31.3
Solyc01g009720.2 Solanum lycopersicum HOM05D003399 ORTHO05D003393 1.9e-06 57.4 254 29.9
Sed0023362 Sechium edule HOM05D003399 ORTHO05D003393 2.5e-06 57.0 183 30.6
Gohir.A03G151600 Gossypium hirsutum HOM05D003399 ORTHO05D003393 4.3e-06 56.2 208 29.8
Peaxi162Scf00128g01764 Petunia axillaris HOM05D003399 ORTHO05D003393 4.3e-06 56.2 228 29.8
MELO3C022349.2 Cucumis melo HOM05D003399 ORTHO05D003393 7.3e-06 55.5 208 31.2
FAN17G2315 Fragaria x ananassa HOM05D003399 ORTHO05D003393 9.6e-06 55.1 245 29.0


User provided reference genes

Program Settings