Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G001200 Cucumis sativus L. HOM05D000082 ORTHO05D000038 1.5e-118 429.5 211 100.0
MELO3C017919.2 Cucumis melo HOM05D000082 ORTHO05D000038 1.5e-78 296.6 206 75.2
MELO3C009075.2 Cucumis melo HOM05D000082 ORTHO05D000038 1.1e-44 184.1 210 51.9
CsaV3_7G001950 Cucumis sativus L. HOM05D000082 ORTHO05D000038 4.2e-44 182.2 210 50.5
CsaV3_7G002010 Cucumis sativus L. HOM05D000082 ORTHO05D000038 4.2e-44 182.2 210 50.5
ClCG04G000540 Citrullus lanatus HOM05D000082 ORTHO05D000038 1.9e-20 103.6 209 39.2
CsaV3_3G047400 Cucumis sativus L. HOM05D000082 ORTHO05D000038 4.4e-17 92.4 171 38.0
MELO3C003583.2 Cucumis melo HOM05D000082 ORTHO05D000038 5.7e-17 92.0 185 35.7
Sed0002646 Sechium edule HOM05D000082 ORTHO05D000038 5.7e-17 92.0 184 35.3
MELO3C023130.2 Cucumis melo HOM05D000082 ORTHO05D000038 2.8e-16 89.7 203 36.5
MELO3C008980.2 Cucumis melo HOM05D000082 ORTHO05D000038 4.1e-15 85.9 206 34.5
CsaV3_2G036020 Cucumis sativus L. HOM05D000082 ORTHO05D014613 5.3e-15 85.5 196 34.7
Sed0000724 Sechium edule HOM05D000082 ORTHO05D000038 5.3e-15 85.5 180 35.0
Sed0020471 Sechium edule HOM05D000082 ORTHO05D025067 2.6e-14 83.2 193 35.2
CsaV3_2G011420 Cucumis sativus L. HOM05D000082 ORTHO05D000038 3.5e-14 82.8 211 33.2
MELO3C024019.2 Cucumis melo HOM05D010671 ORTHO05D025067 1.3e-13 80.9 178 33.1
Sed0025763 Sechium edule HOM05D000082 ORTHO05D000038 4.2e-12 75.9 140 32.1
CsaV3_1G039540 Cucumis sativus L. HOM05D000001 ORTHO05D000003 7.2e-12 75.1 177 32.8
Sed0011597 Sechium edule HOM05D000082 ORTHO05D000038 1.6e-11 73.9 64 45.3
MELO3C020462.2 Cucumis melo HOM05D000082 ORTHO05D000038 6.1e-11 72.0 213 33.3
CsaV3_3G003210 Cucumis sativus L. HOM05D000082 ORTHO05D025067 3.0e-10 69.7 227 28.2
Sed0020057 Sechium edule HOM05D000082 ORTHO05D000038 4.4e-09 65.9 51 52.9
Manes.03G042200 Manihot esculenta HOM05D015908 ORTHO05D014613 1.4e-07 60.8 158 28.5
Manes.12G057061 Manihot esculenta HOM05D015908 ORTHO05D014613 1.4e-07 60.8 166 28.9
Sed0011285 Sechium edule HOM05D009340 ORTHO05D000038 1.4e-07 60.8 37 67.6
MD14G1196800 Malus domestica HOM05D000082 ORTHO05D000038 1.8e-07 60.5 62 45.2
PGR142G1050 Punica granatum HOM05D000082 ORTHO05D000038 1.8e-07 60.5 116 34.5
Sed0019135 Sechium edule HOM05D009340 ORTHO05D000038 1.8e-07 60.5 40 60.0
CsaV3_3G031730 Cucumis sativus L. HOM05D000082 ORTHO05D000038 9.1e-07 58.2 73 41.1
Sed0000276 Sechium edule HOM05D009340 ORTHO05D000038 9.1e-07 58.2 165 29.7
Thecc.03G279000 Theobroma cacao HOM05D000082 ORTHO05D000038 9.1e-07 58.2 98 33.7
TWI09G0681 Tripterygium wilfordii HOM05D066252 ORTHO05D000038 9.1e-07 58.2 193 26.4
ClCG07G002000 Citrullus lanatus HOM05D000082 ORTHO05D025067 1.2e-06 57.8 177 32.8
Manes.04G105900 Manihot esculenta HOM05D015908 ORTHO05D014613 1.6e-06 57.4 186 26.3
COL.COLO4_11210 Corchorus olitorius HOM05D000082 ORTHO05D000038 2.0e-06 57.0 79 35.4
Manes.04G106900 Manihot esculenta HOM05D015908 ORTHO05D014613 2.0e-06 57.0 163 27.6
Sabra19G0097000 Salix brachista HOM05D000082 ORTHO05D000038 2.0e-06 57.0 125 30.4
Gohir.A06G045100 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.7e-06 56.6 116 31.9
MELO3C024018.2 Cucumis melo HOM05D018412 ORTHO05D000038 4.5e-06 55.8 54 46.3
Cpa.g.sc26.126 Carica papaya HOM05D000082 ORTHO05D000038 5.9e-06 55.5 67 38.8
Gorai.010G050800 Gossypium raimondii HOM05D000082 ORTHO05D000038 7.7e-06 55.1 117 35.9
PGSC0003DMG400002830 Solanum tuberosum HOM05D000082 ORTHO05D000038 7.7e-06 55.1 61 44.3


User provided reference genes

Program Settings