Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 0.0e+00 1561.2 906 100.0
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 0.0e+00 1302.7 916 86.5
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 2.3e-285 985.7 941 66.8
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 1.8e-168 597.4 937 51.4
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 6.5e-86 323.2 978 34.9
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 1.5e-85 322.0 976 34.8
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 3.2e-77 294.3 1031 34.2
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 2.6e-74 284.6 973 37.0
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 9.2e-72 276.2 973 33.6
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 4.5e-71 273.9 970 33.0
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 1.1e-69 269.2 989 35.3
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 1.2e-68 265.8 961 33.4
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 2.9e-65 254.6 939 31.9
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.9e-65 254.6 929 32.1
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 4.9e-65 253.8 916 32.6
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 1.7e-62 245.4 968 30.8
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 4.3e-61 240.7 937 33.0
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 3.6e-60 237.7 930 33.2
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 2.3e-59 235.0 954 31.6
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 4.0e-59 234.2 951 30.6
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 6.8e-59 233.4 942 30.7
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 4.4e-58 230.7 939 35.9
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 4.9e-57 227.3 939 30.2
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 1.2e-55 222.6 940 33.3
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 2.0e-55 221.9 922 31.0
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 1.7e-54 218.8 949 31.5
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 1.1e-53 216.1 971 33.3
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.1e-53 216.1 967 32.3
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 1.1e-53 216.1 988 30.2
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 1.6e-52 212.2 964 32.3
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 1.6e-52 212.2 946 30.7
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 4.7e-52 210.7 367 45.2
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 8.1e-52 209.9 933 29.8
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.1e-51 209.5 968 30.9
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 4.0e-51 207.6 946 30.5
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 2.2e-49 201.8 937 30.1
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 4.9e-49 200.7 936 34.5
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 1.1e-48 199.5 961 31.6
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 2.4e-48 198.4 946 29.1
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 7.1e-48 196.8 968 29.3
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 7.1e-48 196.8 968 28.1
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 2.7e-47 194.9 1011 29.8
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 3.5e-47 194.5 952 28.9
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 7.8e-47 193.4 956 30.0
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 1.3e-46 192.6 983 28.4
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.7e-46 192.2 976 29.4
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 8.6e-46 189.9 933 30.0
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 1.1e-45 189.5 959 29.5
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 1.9e-45 188.7 959 31.6
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 1.9e-45 188.7 941 32.3
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 3.3e-45 188.0 928 29.5
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 4.3e-45 187.6 973 29.5
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 1.1e-43 183.0 908 29.8
Lalb_Chr15g0087631 Lupinus albus HOM05D004628 ORTHO05D005166 1.4e-43 182.6 532 35.2
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 6.8e-43 180.3 969 29.7
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 6.8e-43 180.3 958 28.2
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 2.6e-42 178.3 923 29.3
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 5.8e-42 177.2 972 29.0
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 5.8e-42 177.2 943 29.9
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 7.6e-42 176.8 1036 26.3
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 9.9e-42 176.4 942 32.3
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 1.1e-40 172.9 984 34.2
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 2.4e-40 171.8 921 29.5
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 2.4e-40 171.8 938 31.7
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 4.1e-40 171.0 966 28.3
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 4.1e-40 171.0 943 28.1
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.2e-39 169.5 475 33.1
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 2.7e-39 168.3 380 36.8
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 1.7e-38 165.6 154 61.7
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 3.0e-38 164.9 960 29.1
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 3.9e-38 164.5 456 33.1
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 5.1e-38 164.1 930 27.7
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 5.1e-38 164.1 521 30.7
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 2.5e-37 161.8 341 39.6
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 1.2e-36 159.5 965 30.9
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 4.7e-36 157.5 946 29.2
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 6.2e-36 157.1 986 28.1
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 4.4e-34 151.0 964 32.9
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 4.4e-34 151.0 970 27.6
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 2.2e-33 148.7 965 27.7
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 6.4e-33 147.1 930 29.0
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 2.4e-32 145.2 942 27.6
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 4.2e-32 144.4 930 29.0
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 7.1e-32 143.7 907 27.2
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 2.3e-30 138.7 967 26.9
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 2.3e-30 138.7 512 30.3
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.5e-29 136.0 976 28.4
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 7.3e-29 133.7 933 26.6
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 2.0e-26 125.6 989 26.7
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 3.4e-26 124.8 853 29.1
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 5.8e-26 124.0 969 26.3
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 9.9e-26 123.2 947 28.7
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 9.9e-26 123.2 929 29.3
Psat4g006640 Pisum sativum HOM05D004628 ORTHO05D005166 3.2e-24 118.2 1011 26.0
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 7.1e-24 117.1 932 28.4
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 6.0e-23 114.0 924 25.2
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 5.1e-22 110.9 976 28.1
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 1.5e-21 109.4 927 24.8
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 3.3e-21 108.2 935 26.0
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea HOM05D004628 ORTHO05D005166 4.3e-21 107.8 298 33.6
Psat6g212600 Pisum sativum HOM05D004628 ORTHO05D005166 4.3e-21 107.8 282 34.4
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 7.4e-21 107.1 939 28.2
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 1.6e-20 105.9 902 25.2
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 4.8e-20 104.4 928 27.7
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 8.1e-20 103.6 925 25.4
AL1G28790 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 2.4e-19 102.1 954 27.1
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 2.4e-19 102.1 960 25.1
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 5.3e-19 100.9 946 27.1
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 2.0e-18 99.0 980 25.1
Carub.0001s1637 Capsella rubella HOM05D004628 ORTHO05D005166 1.7e-17 95.9 953 25.1
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 2.2e-17 95.5 940 25.1
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 3.8e-17 94.7 978 25.9
AT1G16630 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 6.4e-17 94.0 985 25.3
CAN.G289.56 Capsicum annuum HOM05D004628 ORTHO05D005166 6.4e-17 94.0 322 32.9
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 5.5e-16 90.9 931 24.4
CAN.G289.65 Capsicum annuum HOM05D004628 ORTHO05D005166 2.1e-15 89.0 271 36.9
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 2.7e-15 88.6 291 32.0
arahy.Tifrunner.gnm1.ann1.GD5ZZG Arachis hypogaea HOM05D004628 ORTHO05D005166 2.8e-12 78.6 269 33.1
Sp1g14770 Schrenkiella parvula HOM05D004628 ORTHO05D005166 4.8e-12 77.8 963 24.9
Psat5g077040 Pisum sativum HOM05D004628 ORTHO05D005166 1.8e-11 75.9 118 42.4
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 4.0e-11 74.7 347 30.0
A06p12620 Brassica napus HOM05D004628 ORTHO05D005166 9.0e-11 73.6 985 23.4
CAN.G535.2 Capsicum annuum HOM05D004628 ORTHO05D005166 3.4e-10 71.6 128 43.0
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 7.6e-10 70.5 78 59.0
CARHR017100 Cardamine hirsuta HOM05D004628 ORTHO05D005166 1.7e-09 69.3 964 26.7
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 2.2e-09 68.9 175 38.9
C05p14910 Brassica napus HOM05D004628 ORTHO05D005166 2.9e-09 68.6 989 22.9
FvH4_6g23772 Fragaria vesca HOM05D004628 ORTHO05D005166 2.9e-09 68.6 53 71.7
Nn5g30859 Nelumbo nucifera HOM05D004628 ORTHO05D005166 2.9e-09 68.6 104 47.1
CAN.G289.55 Capsicum annuum HOM05D004628 ORTHO05D005166 8.4e-09 67.0 239 32.2
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 1.1e-08 66.6 336 30.4
VMungo1215G3006 Vigna mungo HOM05D004628 ORTHO05D005166 1.1e-08 66.6 82 57.3
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.4e-08 66.2 153 36.6
Psat0ss6263g0240 Pisum sativum HOM05D004165 ORTHO05D005166 1.9e-08 65.9 79 48.1
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 3.2e-08 65.1 969 25.4
BraA06t24423Z Brassica rapa HOM05D004628 ORTHO05D005166 2.1e-07 62.4 1023 23.6
FAN09G3722 Fragaria x ananassa HOM05D004628 ORTHO05D005166 2.7e-07 62.0 125 42.4
BcaNung07335 Brassica carinata HOM05D004628 ORTHO05D005166 1.0e-06 60.1 65 61.5
HPP92_001855 Vanilla planifolia HOM05D004628 ORTHO05D005166 1.3e-06 59.7 455 27.0
Nn1g01808 Nelumbo nucifera HOM05D004628 ORTHO05D005166 2.3e-06 58.9 87 49.4
CAN.G289.57 Capsicum annuum HOM05D004628 ORTHO05D005166 8.7e-06 57.0 141 34.0


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