Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 6.9e-73 277.3 152 100.0
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.0e-72 275.8 151 100.0
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 9.0e-57 223.8 127 97.6
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 4.4e-43 178.3 133 78.2
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 9.7e-35 150.6 121 69.4
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.3e-34 150.2 118 69.5
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.7e-34 149.8 121 65.3
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 3.7e-34 148.7 145 57.9
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 8.2e-34 147.5 119 68.1
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 8.2e-34 147.5 119 68.1
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.4e-33 146.7 116 68.1
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.4e-33 146.7 123 67.5
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 4.1e-33 145.2 123 67.5
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 9.1e-33 144.1 115 68.7
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 9.1e-33 144.1 119 67.2
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 1.2e-32 143.7 126 65.1
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 2.7e-32 142.5 124 65.3
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.0e-31 140.6 121 66.1
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.0e-31 140.6 120 62.5
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.7e-31 139.8 139 59.7
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 2.2e-31 139.4 126 64.3
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 2.2e-31 139.4 125 63.2
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.9e-31 139.0 121 62.8
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 2.9e-31 139.0 119 63.9
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 5.0e-31 138.3 120 65.0
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 5.0e-31 138.3 110 66.4
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 6.5e-31 137.9 120 61.7
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 8.5e-31 137.5 122 62.3
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.5e-30 136.7 118 64.4
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 1.9e-30 136.3 126 59.5
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 2.5e-30 136.0 124 59.7
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 4.2e-30 135.2 120 63.3
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 4.2e-30 135.2 124 59.7
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 5.5e-30 134.8 111 65.8
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 7.2e-30 134.4 124 59.7
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 7.2e-30 134.4 112 66.1
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 7.2e-30 134.4 109 67.9
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 9.4e-30 134.0 134 57.5
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 9.4e-30 134.0 129 62.8
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 1.2e-29 133.7 115 63.5
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 1.2e-29 133.7 124 63.7
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 1.2e-29 133.7 114 65.8
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.6e-29 133.3 120 60.8
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 2.1e-29 132.9 128 60.2
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.1e-29 132.9 132 62.1
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.1e-29 132.9 132 61.4
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.1e-29 132.9 124 59.7
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 4.7e-29 131.7 134 56.7
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 6.1e-29 131.3 124 57.3
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 6.1e-29 131.3 103 68.0
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.4e-28 130.2 110 67.3
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 1.4e-28 130.2 90 82.2
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 2.3e-28 129.4 109 65.1
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 3.0e-28 129.0 108 66.7
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 4.0e-28 128.6 112 64.3
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 6.8e-28 127.9 151 51.7
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 1.5e-27 126.7 114 64.9
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 3.4e-27 125.6 106 67.9
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 4.4e-27 125.2 101 70.3
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 4.4e-27 125.2 101 70.3
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 4.4e-27 125.2 101 70.3
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 4.4e-27 125.2 101 70.3
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 4.4e-27 125.2 101 70.3
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 5.7e-27 124.8 117 62.4
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 7.5e-27 124.4 101 69.3
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 4.8e-26 121.7 114 58.8
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 6.3e-26 121.3 106 66.0
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 6.3e-26 121.3 120 60.8
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.1e-25 120.6 106 61.3
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 1.4e-25 120.2 107 63.6
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.4e-25 120.2 147 49.7
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 1.8e-25 119.8 106 65.1
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 3.1e-25 119.0 108 60.2
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 4.1e-25 118.6 116 59.5
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.4e-25 118.2 106 60.4
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 7.0e-25 117.9 114 56.1
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 7.0e-25 117.9 119 58.8
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 2.7e-24 115.9 113 56.6
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 5.9e-24 114.8 120 59.2
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 7.7e-24 114.4 161 46.0
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 1.7e-23 113.2 110 57.3
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.2e-23 112.8 115 53.0
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 2.9e-23 112.5 140 48.6
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 3.2e-22 109.0 110 54.5
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 7.2e-22 107.8 93 62.4
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 1.6e-21 106.7 90 63.3
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 2.3e-20 102.8 123 49.6
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 6.8e-20 101.3 97 56.7
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 1.5e-19 100.1 98 59.2
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 2.0e-19 99.8 93 60.2
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 5.7e-19 98.2 78 65.4
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 6.3e-18 94.7 85 57.6
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 1.8e-17 93.2 80 63.8
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 1.8e-17 93.2 77 64.9
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 5.4e-17 91.7 81 59.3
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 7.0e-17 91.3 70 67.1
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 4.5e-16 88.6 106 49.1
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 5.9e-16 88.2 79 57.0
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 5.9e-16 88.2 73 63.0
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 2.3e-15 86.3 77 57.1
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 3.8e-15 85.5 71 60.6
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 3.3e-14 82.4 110 53.6
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 3.3e-14 82.4 110 53.6
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 1.6e-13 80.1 76 63.2
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 4.7e-13 78.6 57 71.9
Sed0003750 Sechium edule HOM05D006869 ORTHO05D008641 1.8e-09 66.6 126 41.3
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 3.2e-09 65.9 68 52.9
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 4.1e-09 65.5 47 70.2
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 5.4e-09 65.1 97 41.2
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 3.5e-08 62.4 45 64.4
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 3.5e-08 62.4 104 38.5
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 3.5e-08 62.4 49 63.3
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 1.7e-07 60.1 49 69.4


User provided reference genes

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