Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 7.6e-53 210.3 112 100.0
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.1e-40 169.9 110 86.4
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 1.1e-32 143.3 102 79.4
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 3.5e-21 105.1 82 69.5
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 2.2e-20 102.4 101 59.4
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 2.2e-20 102.4 98 59.2
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.9e-20 102.1 99 59.6
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 6.5e-20 100.9 76 71.1
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 8.5e-20 100.5 119 52.9
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 1.1e-19 100.1 93 58.1
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 1.1e-19 100.1 81 64.2
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 2.5e-19 99.0 100 59.0
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.2e-19 97.4 87 59.8
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 9.4e-19 97.1 83 62.7
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 9.4e-19 97.1 87 59.8
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 9.4e-19 97.1 87 59.8
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 9.4e-19 97.1 82 65.9
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 9.4e-19 97.1 99 59.6
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.2e-18 96.7 94 58.5
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 1.6e-18 96.3 99 58.6
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.1e-18 95.9 92 59.8
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.1e-18 95.9 92 59.8
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 2.1e-18 95.9 90 58.9
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 2.1e-18 95.9 93 55.9
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 2.7e-18 95.5 108 54.6
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 2.7e-18 95.5 81 63.0
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 4.7e-18 94.7 87 60.9
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 4.7e-18 94.7 83 61.4
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 4.7e-18 94.7 97 57.7
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 6.1e-18 94.4 76 69.7
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 8.0e-18 94.0 78 66.7
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.0e-17 93.6 92 58.7
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 1.0e-17 93.6 82 61.0
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 2.3e-17 92.4 88 55.7
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 2.3e-17 92.4 74 66.2
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 4.0e-17 91.7 72 69.4
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 4.0e-17 91.7 72 69.4
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 5.2e-17 91.3 106 52.8
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 8.8e-17 90.5 89 59.6
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 8.8e-17 90.5 109 53.2
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 8.8e-17 90.5 109 53.2
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 1.2e-16 90.1 76 60.5
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 1.2e-16 90.1 80 62.5
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.5e-16 89.7 82 58.5
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.5e-16 89.7 82 58.5
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 2.0e-16 89.4 82 58.5
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 4.4e-16 88.2 81 61.7
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 5.7e-16 87.8 81 60.5
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 9.7e-16 87.0 77 57.1
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.3e-15 86.7 82 57.3
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.2e-15 85.9 78 61.5
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 4.8e-15 84.7 77 59.7
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 6.3e-15 84.3 92 51.1
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 6.3e-15 84.3 74 62.2
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 8.2e-15 84.0 98 52.0
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 8.2e-15 84.0 74 62.2
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 1.1e-14 83.6 92 51.1
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 1.4e-14 83.2 67 64.2
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.8e-14 82.8 93 54.8
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.8e-14 82.8 70 65.7
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 3.1e-14 82.0 69 65.2
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 4.1e-14 81.6 83 55.4
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 4.1e-14 81.6 80 56.2
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 5.3e-14 81.3 92 57.6
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 9.1e-14 80.5 86 50.0
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 4.5e-13 78.2 76 55.3
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 5.9e-13 77.8 85 49.4
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 1.0e-12 77.0 79 55.7
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 1.0e-12 77.0 79 55.7
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 1.0e-12 77.0 79 55.7
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 1.0e-12 77.0 79 55.7
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 1.0e-12 77.0 79 55.7
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 3.8e-12 75.1 113 47.8
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 6.5e-12 74.3 78 56.4
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 8.5e-12 73.9 70 58.6
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 8.5e-12 73.9 76 55.3
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 8.5e-12 73.9 79 54.4
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 1.1e-11 73.6 80 53.8
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 1.1e-11 73.6 69 59.4
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 1.1e-11 73.6 69 59.4
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.5e-11 73.2 70 58.6
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.5e-11 73.2 70 58.6
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.5e-11 73.2 79 53.2
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.5e-11 73.2 108 49.1
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.9e-11 72.8 78 59.0
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 1.9e-11 72.8 48 77.1
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 2.5e-11 72.4 71 53.5
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 2.5e-11 72.4 74 58.1
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 3.2e-11 72.0 75 62.7
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 4.2e-11 71.6 88 51.1
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 5.5e-11 71.2 75 53.3
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 9.4e-11 70.5 74 58.1
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.6e-10 69.7 79 50.6
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 2.1e-10 69.3 72 55.6
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 2.7e-10 68.9 108 46.3
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 3.6e-10 68.6 75 49.3
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 1.4e-09 66.6 85 47.1
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.8e-09 66.2 70 55.7
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 4.0e-09 65.1 70 54.3
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 5.2e-09 64.7 72 54.2
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 2.6e-08 62.4 88 43.2
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 7.5e-08 60.8 70 52.9
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 7.5e-08 60.8 70 52.9


User provided reference genes

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