Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 2.5e-73 278.9 158 100.0
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 7.9e-72 273.9 158 98.1
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.6e-64 248.4 151 93.4
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.1e-62 243.4 159 88.1
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 2.6e-59 232.3 159 83.6
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 1.6e-56 223.0 161 81.4
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.7e-56 222.2 160 82.5
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 6.1e-56 221.1 166 77.1
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.1e-56 221.1 158 80.4
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 1.8e-55 219.5 158 80.4
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 4.0e-55 218.4 159 80.5
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 5.2e-55 218.0 158 79.7
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 8.8e-55 217.2 159 80.5
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 2.0e-54 216.1 158 79.7
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.0e-54 216.1 161 81.4
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 2.0e-54 216.1 159 79.9
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.3e-54 215.3 161 79.5
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 5.7e-54 214.5 159 81.8
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 7.5e-54 214.2 160 78.1
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 7.5e-54 214.2 158 79.1
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.7e-53 213.0 161 80.1
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 3.7e-53 211.8 159 80.5
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 3.7e-53 211.8 158 79.1
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 4.8e-53 211.5 165 74.5
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 4.8e-53 211.5 162 80.2
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 6.3e-53 211.1 159 77.4
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 8.2e-53 210.7 160 79.4
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.1e-52 210.3 158 77.8
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.8e-52 209.5 160 78.8
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 5.3e-52 208.0 161 77.0
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 5.3e-52 208.0 151 80.8
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 7.0e-52 207.6 161 79.5
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 9.1e-52 207.2 160 79.4
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.7e-51 205.7 160 76.2
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.0e-50 203.8 158 77.2
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 2.9e-50 202.2 162 76.5
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.9e-50 202.2 169 74.0
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 3.8e-50 201.8 160 76.9
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 8.5e-50 200.7 159 78.6
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 1.9e-49 199.5 158 75.3
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.5e-49 199.1 160 76.2
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.2e-49 198.7 151 78.1
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 3.2e-49 198.7 161 77.6
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 4.2e-49 198.4 159 78.6
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 9.4e-49 197.2 154 78.6
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 1.6e-48 196.4 167 71.9
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 6.1e-48 194.5 160 75.0
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 1.8e-47 193.0 157 76.4
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 2.3e-47 192.6 150 78.7
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 2.3e-47 192.6 158 71.5
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.0e-47 191.8 197 62.9
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 8.8e-47 190.7 151 76.2
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 2.6e-46 189.1 161 73.9
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 5.7e-46 188.0 152 73.7
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 9.8e-46 187.2 159 74.8
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.7e-45 186.4 152 76.3
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 1.7e-45 186.4 198 63.1
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 2.2e-45 186.0 155 72.3
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 2.2e-45 186.0 156 74.4
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 2.8e-45 185.7 157 75.2
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 3.7e-45 185.3 150 73.3
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 4.8e-45 184.9 155 72.3
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 8.3e-45 184.1 158 74.1
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 8.3e-45 184.1 156 74.4
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 3.1e-44 182.2 193 52.3
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 7.0e-44 181.0 164 72.6
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 2.0e-43 179.5 157 71.3
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 4.5e-43 178.3 157 70.7
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 5.9e-43 177.9 153 71.2
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 7.7e-43 177.6 149 71.8
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 1.0e-42 177.2 150 72.7
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.3e-42 176.8 157 73.2
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.3e-42 176.8 160 70.6
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 1.3e-42 176.8 141 75.9
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 2.9e-42 175.6 150 72.0
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 5.0e-42 174.9 150 73.3
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 8.5e-42 174.1 151 72.2
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 8.5e-42 174.1 154 72.7
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 3.2e-41 172.2 158 72.8
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.2e-41 171.0 158 68.4
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 3.6e-40 168.7 123 80.5
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 2.3e-39 166.0 161 69.6
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 3.0e-39 165.6 144 72.2
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 5.2e-39 164.9 144 71.5
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 6.8e-39 164.5 144 71.5
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 8.8e-39 164.1 144 71.5
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 2.0e-38 162.9 171 55.6
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 5.7e-38 161.4 165 63.6
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.7e-37 158.7 185 50.3
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 4.1e-36 155.2 127 70.1
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 2.3e-34 149.4 154 53.9
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.3e-33 145.6 115 69.6
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 7.3e-33 144.4 115 70.4
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 2.1e-32 142.9 102 74.5
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.6e-32 142.1 153 64.1
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 1.8e-31 139.8 150 61.3
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 5.2e-31 138.3 108 63.9
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 6.8e-31 137.9 115 70.4
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 2.0e-27 126.3 140 54.3
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 5.9e-27 124.8 123 58.5
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 9.5e-25 117.5 160 52.5
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.2e-22 110.5 102 57.8
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 2.0e-19 99.8 167 43.1
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 2.1e-16 89.7 96 53.1
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 6.8e-15 84.7 91 50.5
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 6.4e-13 78.2 103 48.5
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 3.2e-12 75.9 60 61.7
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 5.1e-10 68.6 96 40.6
FAN27G0088 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.8e-08 62.8 56 60.7
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 6.2e-08 61.6 67 55.2


User provided reference genes

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