Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G043500 Cucumis sativus L. HOM05D002829 ORTHO05D003124 1.5e-89 332.8 162 100.0
MELO3C026752.2 Cucumis melo HOM05D002829 ORTHO05D003124 6.7e-66 254.2 258 57.0
ClCG10G013080 Citrullus lanatus HOM05D002829 ORTHO05D003124 1.3e-56 223.4 259 52.5
Sed0018664 Sechium edule HOM05D002829 ORTHO05D003124 1.9e-28 129.8 244 38.1
TAR622G0550 Trochodendron aralioides HOM05D002829 ORTHO05D003124 2.5e-20 102.8 270 33.0
Potri.001G070700 Populus trichocarpa HOM05D002829 ORTHO05D003124 5.7e-17 91.7 273 31.5
QL03p048302 Quercus lobata HOM05D002829 ORTHO05D003124 3.7e-16 89.0 280 31.8
Potri.003G160000 Populus trichocarpa HOM05D002829 ORTHO05D003124 1.1e-15 87.4 278 31.7
Sabra01G0049600 Salix brachista HOM05D002829 ORTHO05D003124 1.8e-15 86.7 232 32.8
Cfa009474 Carpinus fangiana HOM05D002829 ORTHO05D003124 2.4e-15 86.3 232 29.7
Manes.08G099100 Manihot esculenta HOM05D002829 ORTHO05D003124 5.4e-15 85.1 234 31.6
Sabra03G0116300 Salix brachista HOM05D002829 ORTHO05D003124 5.4e-15 85.1 269 29.4
TWI75G0707 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 2.0e-14 83.2 271 30.3
Haze_12531 Corylus avellana HOM05D002829 ORTHO05D003124 4.5e-14 82.0 266 27.8
Duzib264G0406 Durio zibethinus HOM05D002829 ORTHO05D003124 1.3e-13 80.5 229 30.1
Sed0013476 Sechium edule HOM05D002829 ORTHO05D003124 1.7e-13 80.1 207 32.4
TWI18G0126 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 1.7e-13 80.1 232 30.6
Cpa.g.sc38.55 Carica papaya HOM05D002829 ORTHO05D003124 6.5e-13 78.2 253 28.1
TWI36G1156 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 6.5e-13 78.2 220 31.8
MBI07_g42014_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D010528 8.5e-13 77.8 213 29.6
Thecc.01G239500 Theobroma cacao HOM05D002829 ORTHO05D003124 8.5e-13 77.8 264 29.5
Eucgr.J01660 Eucalyptus grandis HOM05D002829 ORTHO05D003124 1.5e-12 77.0 307 27.0
CiPaw.05G097800 Carya illinoinensis HOM05D002829 ORTHO05D003124 4.2e-12 75.5 285 26.3
CiPaw.06G111500 Carya illinoinensis HOM05D002829 ORTHO05D003124 2.7e-11 72.8 278 27.3
ATR0582G260 Amborella trichopoda HOM05D002829 ORTHO05D003124 4.7e-11 72.0 234 26.9
MD16G1144900 Malus domestica HOM05D002829 ORTHO05D003124 8.0e-11 71.2 231 28.1
Prupe.1G211200 Prunus persica HOM05D002829 ORTHO05D003124 1.4e-10 70.5 198 29.8
Atru.chr12.1478 Acer truncatum HOM05D002829 ORTHO05D003124 5.2e-10 68.6 263 27.4
Nn4g22068 Nelumbo nucifera HOM05D002829 ORTHO05D003124 5.2e-10 68.6 67 55.2
Ciclev10029923m.g Citrus clementina HOM05D002829 ORTHO05D003124 8.8e-10 67.8 184 31.0
Nn3g16206 Nelumbo nucifera HOM05D002829 ORTHO05D003124 8.8e-10 67.8 71 56.3
Gorai.007G068500 Gossypium raimondii HOM05D002829 ORTHO05D003124 1.5e-09 67.0 228 28.5
FvH4_4g22140 Fragaria vesca HOM05D002829 ORTHO05D003124 7.5e-09 64.7 121 39.7
FAN12G1147 Fragaria x ananassa HOM05D002829 ORTHO05D003124 7.5e-09 64.7 121 39.7
Gohir.A11G059300 Gossypium hirsutum HOM05D002829 ORTHO05D003124 7.5e-09 64.7 228 28.9
FAN07G1465 Fragaria x ananassa HOM05D002829 ORTHO05D003124 9.8e-09 64.3 119 39.5
FAN17G0858 Fragaria x ananassa HOM05D002829 ORTHO05D003124 9.8e-09 64.3 119 39.5
MBI11_g17276_MAGBIO Magnolia biondii HOM05D002829 ORTHO05D003124 9.8e-09 64.3 220 26.8
PGR102G0495 Punica granatum HOM05D002829 ORTHO05D003124 1.3e-08 63.9 293 25.9
MD13G1134300 Malus domestica HOM05D002829 ORTHO05D003124 2.2e-08 63.2 217 28.1
CDE09G0437 Ceratophyllum demersum HOM05D002829 ORTHO05D003124 4.9e-08 62.0 46 60.9
Duzib147G1098 Durio zibethinus HOM05D002829 ORTHO05D003124 4.9e-08 62.0 219 29.2
Gohir.D11G063400 Gossypium hirsutum HOM05D002829 ORTHO05D003124 1.1e-07 60.8 228 28.1
PSO017G0067 Papaver somniferum HOM05D002829 ORTHO05D003124 4.1e-07 58.9 79 39.2
AT1G28190 Arabidopsis thaliana HOM05D002829 ORTHO05D003124 2.7e-06 56.2 206 26.2
THA.LOC104820537 Tarenaya hassleriana HOM05D002829 ORTHO05D003124 2.7e-06 56.2 89 41.6
AL1G41730 Arabidopsis lyrata HOM05D002829 ORTHO05D003124 7.7e-06 54.7 69 42.0
Thhalv10008463m.g Eutrema salsugineum HOM05D002829 ORTHO05D003124 7.7e-06 54.7 56 53.6


User provided reference genes

Program Settings