Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G040570 Cucumis sativus L. HOM05D007691 ORTHO05D008758 5.8e-46 187.2 94 100.0
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 1.3e-26 122.9 97 75.3
Sed0014810 Sechium edule HOM05D007691 ORTHO05D008758 1.8e-23 112.5 88 70.5
Sed0006259 Sechium edule HOM05D007691 ORTHO05D008758 1.2e-19 99.8 95 60.0
MELO3C001368.2 Cucumis melo HOM05D020312 ORTHO05D029163 2.0e-14 82.4 52 86.5
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 7.7e-14 80.5 84 56.0
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.4e-12 76.3 87 54.0
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 2.5e-12 75.5 86 50.0
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 1.6e-11 72.8 97 49.5
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 4.6e-11 71.2 86 54.7
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 6.1e-11 70.9 88 51.1
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.4e-10 69.7 88 51.1
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 1.8e-10 69.3 90 52.2
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 3.9e-10 68.2 86 51.2
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 6.7e-10 67.4 87 48.3
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 6.7e-10 67.4 101 45.5
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 8.8e-10 67.0 83 47.0
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.1e-09 66.6 89 48.3
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 1.1e-09 66.6 87 50.6
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 2.0e-09 65.9 85 49.4
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 4.3e-09 64.7 88 46.6
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 4.3e-09 64.7 89 50.6
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 4.3e-09 64.7 88 46.6
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 9.7e-09 63.5 95 41.1
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.3e-08 63.2 87 47.1
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.7e-08 62.8 86 45.3
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 1.7e-08 62.8 83 49.4
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 2.2e-08 62.4 93 43.0
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 2.8e-08 62.0 85 45.9
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 8.2e-08 60.5 81 44.4
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 8.2e-08 60.5 89 47.2
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 1.4e-07 59.7 92 43.5
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.4e-07 58.9 91 40.7
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 2.4e-07 58.9 87 42.5
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 3.1e-07 58.5 89 43.8
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 3.1e-07 58.5 86 44.2
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 3.1e-07 58.5 91 45.1
SalBow1G6856 Salvia bowleyana HOM05D007691 ORTHO05D008758 3.1e-07 58.5 70 47.1
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 4.1e-07 58.2 95 41.1
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 4.1e-07 58.2 95 41.1
PGR142G1160 Punica granatum HOM05D007691 ORTHO05D008758 9.1e-07 57.0 87 47.1
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.2e-06 56.6 98 38.8
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 2.0e-06 55.8 85 43.5
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 2.6e-06 55.5 99 42.4
Gorai.004G252600 Gossypium raimondii HOM05D007691 ORTHO05D008758 2.6e-06 55.5 86 41.9
QL07p017231 Quercus lobata HOM05D007691 ORTHO05D008758 2.6e-06 55.5 97 43.3
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 7.7e-06 53.9 90 41.1
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 7.7e-06 53.9 89 43.8


User provided reference genes

Program Settings