Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 1.1e-289 999.2 487 100.0
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 2.3e-287 991.5 487 99.4
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 5.1e-279 963.8 487 96.5
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.3e-274 949.1 487 94.7
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 4.2e-273 944.1 487 92.0
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 7.2e-273 943.3 487 92.6
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 9.4e-273 943.0 487 93.0
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.2e-272 942.6 487 92.6
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.2e-272 942.6 487 93.0
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 4.6e-272 940.6 487 92.6
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 7.9e-272 939.9 486 93.0
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 5.1e-271 937.2 487 92.8
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 1.1e-270 936.0 487 92.0
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.5e-270 935.6 487 92.4
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.0e-270 935.3 487 91.2
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 3.7e-269 931.0 487 92.2
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.8e-268 928.7 487 91.8
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 3.1e-268 927.9 487 92.0
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 4.1e-268 927.5 483 92.8
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 9.1e-268 926.4 487 92.0
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 1.5e-267 925.6 486 91.6
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 1.5e-267 925.6 492 91.5
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 2.6e-267 924.9 487 92.0
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 4.5e-267 924.1 487 91.8
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 5.9e-267 923.7 487 91.0
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 5.9e-267 923.7 487 91.6
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 5.9e-267 923.7 487 91.8
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 1.3e-266 922.5 483 91.9
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 2.2e-266 921.8 483 92.1
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 2.2e-266 921.8 483 91.7
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 8.5e-266 919.8 487 91.4
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 8.5e-266 919.8 487 90.1
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 1.9e-265 918.7 483 91.3
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.5e-265 918.3 486 91.4
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 2.5e-265 918.3 487 90.8
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 3.2e-265 917.9 487 91.8
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 5.5e-265 917.1 487 91.2
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 5.5e-265 917.1 486 90.9
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 9.4e-265 916.4 483 91.5
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 9.4e-265 916.4 486 91.6
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.2e-264 916.0 485 90.9
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 1.6e-264 915.6 483 90.9
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 2.1e-264 915.2 485 91.3
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 3.6e-264 914.4 483 90.9
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 1.8e-263 912.1 483 90.9
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 1.8e-263 912.1 485 90.9
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.3e-263 911.8 485 90.3
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 3.0e-263 911.4 486 89.9
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 5.1e-263 910.6 486 90.3
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 5.1e-263 910.6 486 90.1
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 6.7e-263 910.2 485 90.1
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 6.7e-263 910.2 486 90.7
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 1.1e-262 909.4 486 89.9
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 1.5e-262 909.1 487 90.3
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 1.5e-262 909.1 480 91.2
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 2.0e-262 908.7 483 90.9
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 3.3e-262 907.9 483 90.7
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 3.3e-262 907.9 492 90.7
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 4.4e-262 907.5 486 91.2
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 4.4e-262 907.5 486 90.1
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 9.7e-262 906.4 484 90.3
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 9.7e-262 906.4 486 89.9
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 1.3e-261 906.0 488 90.4
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.3e-261 906.0 487 90.3
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 1.7e-261 905.6 487 90.6
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 1.7e-261 905.6 483 91.1
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 2.2e-261 905.2 486 89.7
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 2.2e-261 905.2 486 89.7
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 2.8e-261 904.8 467 93.1
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 3.7e-261 904.4 487 91.0
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 4.8e-261 904.0 487 90.3
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 4.8e-261 904.0 487 90.3
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 6.3e-261 903.7 485 89.7
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 8.2e-261 903.3 487 90.1
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 1.1e-260 902.9 487 90.1
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 1.1e-260 902.9 480 91.2
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 1.4e-260 902.5 487 90.1
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 1.4e-260 902.5 479 91.0
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 1.8e-260 902.1 481 90.2
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 1.8e-260 902.1 487 90.1
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.8e-260 902.1 486 90.3
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 2.4e-260 901.7 487 89.9
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 3.1e-260 901.4 487 89.9
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 3.1e-260 901.4 485 90.5
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 4.1e-260 901.0 486 90.3
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 5.3e-260 900.6 487 90.3
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 7.0e-260 900.2 486 90.1
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 9.1e-260 899.8 487 89.9
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 2.6e-259 898.3 487 89.5
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 2.6e-259 898.3 487 89.1
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 4.5e-259 897.5 488 90.0
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 7.7e-259 896.7 487 88.9
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 1.0e-258 896.3 485 89.1
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 1.3e-258 896.0 489 89.8
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 2.2e-258 895.2 453 94.7
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 2.9e-258 894.8 483 90.1
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 3.2e-257 891.3 483 90.7
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 3.2e-257 891.3 479 90.8
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 4.2e-257 891.0 480 89.4
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 9.4e-257 889.8 486 88.5
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 2.1e-256 888.6 486 88.3
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 4.7e-256 887.5 481 89.8
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 8.0e-256 886.7 460 93.0
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 2.3e-255 885.2 482 88.6
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 4.0e-255 884.4 437 95.0
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 5.2e-255 884.0 482 88.6
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 2.6e-254 881.7 460 91.7
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 1.7e-250 869.0 483 87.4
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 2.1e-248 862.1 457 90.6
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 5.2e-247 857.4 486 86.6
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 9.8e-246 853.2 482 86.9
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 5.4e-244 847.4 459 86.9
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 5.4e-244 847.4 433 90.5
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.0e-242 843.2 466 88.0
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 9.4e-241 836.6 434 89.6
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 4.0e-239 831.2 408 95.8
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 3.4e-238 828.2 407 96.1
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 4.4e-238 827.8 431 88.6
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 1.4e-236 822.8 407 95.1
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 5.4e-236 820.8 406 94.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.6e-235 819.3 405 94.3
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 5.4e-228 794.3 486 80.7
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 1.6e-227 792.7 433 85.2
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 3.0e-226 788.5 384 97.4
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 9.8e-222 773.5 421 84.1
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 2.7e-219 765.4 427 82.2
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 1.3e-218 763.1 461 79.6
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 8.6e-218 760.4 395 91.4
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.5e-217 759.6 481 80.2
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.1e-209 733.4 393 90.1
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.6e-194 681.0 346 93.6
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 4.9e-189 664.8 369 87.0
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 5.3e-183 644.8 395 73.9
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.2e-179 633.6 486 68.5
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 2.7e-179 632.5 315 94.6
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.6e-171 605.1 487 66.3
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.7e-170 601.3 486 65.8
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.8e-168 595.9 486 65.6
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 6.3e-168 594.7 330 88.5
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.4e-151 540.4 279 91.8
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 6.3e-144 515.0 351 73.8
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.3e-125 454.1 276 75.4
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.1e-115 420.2 203 97.5
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.1e-98 364.8 180 92.8
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.3e-98 363.6 191 89.5
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.9e-93 346.3 172 94.8
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 9.5e-92 341.7 171 93.6
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 6.9e-82 308.9 485 41.0
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 2.3e-77 293.9 151 90.7
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.1e-68 265.0 146 87.0
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 6.9e-66 255.8 164 79.9
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 9.9e-65 251.9 127 96.1
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 1.4e-63 248.1 127 89.0
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 9.6e-60 235.3 147 81.6
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.9e-55 221.1 259 44.8
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 5.7e-52 209.5 102 96.1
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 1.3e-51 208.4 100 95.0
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 7.6e-49 199.1 127 78.7
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 1.7e-35 154.8 92 81.5
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 2.2e-35 154.5 108 68.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 4.8e-35 153.3 77 96.1
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 4.8e-35 153.3 77 96.1
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 3.0e-29 134.0 197 38.6
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 5.2e-29 133.3 69 95.7
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 7.4e-28 129.4 71 87.3
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.3e-27 126.3 68 88.2
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 8.2e-27 125.9 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 8.2e-27 125.9 65 92.3
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.3e-24 118.6 66 84.8
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.9e-24 117.5 66 83.3
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 6.1e-22 109.8 65 80.0
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 8.8e-21 105.9 67 68.7
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 1.5e-20 105.1 65 73.8
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.2e-17 95.5 48 91.7
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 1.9e-15 88.2 188 34.6
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 1.8e-13 81.6 71 59.2
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 6.8e-13 79.7 72 58.3
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 1.5e-12 78.6 72 58.3
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 7.0e-10 69.7 61 60.7
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 2.1e-06 58.2 40 67.5


User provided reference genes

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