Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G039190 Cucumis sativus L. HOM05D000071 ORTHO05D000029 1.8e-133 479.9 399 100.0
MELO3C009665.2 Cucumis melo HOM05D000071 ORTHO05D000029 6.4e-78 295.4 420 74.0
Sed0013520 Sechium edule HOM05D000071 ORTHO05D000029 3.9e-35 153.3 299 61.9
MELO3C002393.2 Cucumis melo HOM05D000071 ORTHO05D000029 4.5e-31 139.8 424 53.3
MELO3C002394.2 Cucumis melo HOM05D000071 ORTHO05D000029 7.7e-31 139.0 415 53.3
CsaV3_1G010020 Cucumis sativus L. HOM05D000071 ORTHO05D000029 1.3e-30 138.3 427 54.6
CsaV3_1G010030 Cucumis sativus L. HOM05D000071 ORTHO05D000029 8.5e-30 135.6 439 47.6
CsaV3_1G010010 Cucumis sativus L. HOM05D000071 ORTHO05D000029 1.1e-29 135.2 425 52.7
Sed0005945 Sechium edule HOM05D000071 ORTHO05D000029 1.2e-28 131.7 444 53.6
CsaV3_1G009990 Cucumis sativus L. HOM05D000071 ORTHO05D000029 1.0e-27 128.6 446 53.4
MELO3C002392.2 Cucumis melo HOM05D000071 ORTHO05D000029 1.1e-26 125.2 305 48.2
ClCG03G004110 Citrullus lanatus HOM05D000071 ORTHO05D000029 1.3e-25 121.7 273 49.5
Sed0028160 Sechium edule HOM05D000071 ORTHO05D000029 1.1e-21 108.6 251 48.6
ClCG02G007350 Citrullus lanatus HOM05D000071 ORTHO05D000029 2.1e-20 104.4 116 51.7
Sed0002125 Sechium edule HOM05D000071 ORTHO05D000029 1.8e-19 101.3 296 52.0
Dinv00308 Davidia involucrata HOM05D000071 ORTHO05D000029 4.4e-18 96.7 417 55.6
Hma1.2p1_0088F.1_g045200 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 3.5e-15 87.0 401 57.1
GSVIVG01001803001 Vitis vinifera HOM05D000071 ORTHO05D000029 4.5e-15 86.7 222 50.9
Dinv02377 Davidia involucrata HOM05D000071 ORTHO05D000029 2.5e-13 80.9 450 52.7
Hma1.2p1_1011F.1_g247580 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 2.5e-13 80.9 424 54.0
FAN11G1027 Fragaria x ananassa HOM05D000071 ORTHO05D000029 7.2e-13 79.3 217 48.8
Dinv02378 Davidia involucrata HOM05D000071 ORTHO05D000029 9.5e-13 79.0 226 47.3
QL10p054842 Quercus lobata HOM05D000071 ORTHO05D000029 1.2e-12 78.6 245 43.3
Atru.chr6.2544 Acer truncatum HOM05D000071 ORTHO05D000029 8.0e-12 75.9 244 42.2
FAN18G0767 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.4e-11 75.1 404 49.3
MD10G1221900 Malus domestica HOM05D000071 ORTHO05D000029 1.8e-11 74.7 405 55.3
Atru.chr6.2539 Acer truncatum HOM05D000071 ORTHO05D000029 8.8e-11 72.4 243 43.6
Hma1.2p1_1220F.1_g268020 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 1.5e-10 71.6 367 49.0
QL05p023568 Quercus lobata HOM05D000071 ORTHO05D000029 1.5e-10 71.6 248 44.4
QL05p023945 Quercus lobata HOM05D000071 ORTHO05D000029 2.6e-10 70.9 247 42.5
QL05p008200 Quercus lobata HOM05D000071 ORTHO05D000029 3.4e-10 70.5 251 42.2
FAN18G3039 Fragaria x ananassa HOM05D000071 ORTHO05D000029 4.4e-10 70.1 222 45.9
QL05p024087 Quercus lobata HOM05D000071 ORTHO05D000029 4.4e-10 70.1 247 42.5
Dinv38634 Davidia involucrata HOM05D000071 ORTHO05D000058 5.7e-10 69.7 426 54.0
CSS0017287 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 7.5e-10 69.3 223 44.8
FvH4_5g08430 Fragaria vesca HOM05D000071 ORTHO05D000029 7.5e-10 69.3 404 51.2
QL05p023979 Quercus lobata HOM05D000071 ORTHO05D000029 7.5e-10 69.3 247 42.1
Lsat_1_v5_gn_8_157700 Lactuca sativa HOM05D000071 ORTHO05D000029 9.8e-10 68.9 193 52.3
Prupe.7G033600 Prunus persica HOM05D000071 ORTHO05D000029 9.8e-10 68.9 180 52.8
QL05p023479 Quercus lobata HOM05D000071 ORTHO05D000029 9.8e-10 68.9 229 43.7
FAN16G0190 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.7e-09 68.2 248 42.3
Prupe.4G116800 Prunus persica HOM05D000071 ORTHO05D000029 2.2e-09 67.8 398 48.0
Prupe.4G122600 Prunus persica HOM05D000071 ORTHO05D000029 2.2e-09 67.8 411 54.7
CSS0042351 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.8e-09 67.4 201 49.3
Ciclev10018317m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.8e-09 67.4 206 46.6
FAN16G0705 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.8e-09 67.4 227 44.9
QL05p023971 Quercus lobata HOM05D000071 ORTHO05D000029 2.8e-09 67.4 245 42.4
COL.COLO4_17185 Corchorus olitorius HOM05D000071 ORTHO05D000029 3.7e-09 67.0 115 38.3
QL93p0310_0045 Quercus lobata HOM05D000071 ORTHO05D000029 3.7e-09 67.0 264 39.4
Thecc.04G034100 Theobroma cacao HOM05D000071 ORTHO05D000029 6.3e-09 66.2 261 39.8
GSVIVG01033113001 Vitis vinifera HOM05D000071 ORTHO05D000029 1.1e-08 65.5 175 54.9
Manes.04G014401 Manihot esculenta HOM05D000071 ORTHO05D000029 1.8e-08 64.7 224 44.2
FvH4_3g12740 Fragaria vesca HOM05D000071 ORTHO05D000029 3.1e-08 63.9 248 43.5
FvH4_3g13435 Fragaria vesca HOM05D000071 ORTHO05D000029 3.1e-08 63.9 413 52.8
Prupe.4G122900 Prunus persica HOM05D000071 ORTHO05D000029 3.1e-08 63.9 97 42.3
Atru.chr6.2545 Acer truncatum HOM05D000071 ORTHO05D000029 4.1e-08 63.5 218 37.6
CSS0049713 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 4.1e-08 63.5 221 43.0
FvH4_5g08450 Fragaria vesca HOM05D000071 ORTHO05D000029 4.1e-08 63.5 222 44.6
MD05G1246100 Malus domestica HOM05D000071 ORTHO05D000029 4.1e-08 63.5 225 42.7
RcHm_v2.0_Chr5g0041631 Rosa chinensis HOM05D000071 ORTHO05D000029 4.1e-08 63.5 242 42.6
QL04p093590 Quercus lobata HOM05D000071 ORTHO05D000029 7.0e-08 62.8 268 40.3
Actinidia33174 Actinidia chinensis HOM05D000071 ORTHO05D000029 9.2e-08 62.4 377 56.5
FAN25G2339 Fragaria x ananassa HOM05D000071 ORTHO05D000029 9.2e-08 62.4 242 42.1
FAN13G2439 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.2e-07 62.0 109 38.5
FAN25G1389 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.2e-07 62.0 186 38.2
RcHm_v2.0_Chr5g0022741 Rosa chinensis HOM05D000071 ORTHO05D000029 1.2e-07 62.0 243 42.4
Prupe.4G122800 Prunus persica HOM05D000071 ORTHO05D000029 1.6e-07 61.6 97 41.2
Lsat_1_v5_gn_8_157940 Lactuca sativa HOM05D000071 ORTHO05D000029 2.0e-07 61.2 232 43.1
Prupe.4G122000 Prunus persica HOM05D000071 ORTHO05D000029 2.0e-07 61.2 238 38.7
QL04p093573 Quercus lobata HOM05D000071 ORTHO05D000029 2.0e-07 61.2 263 39.5
MBI17_g34868_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 2.7e-07 60.8 103 37.9
MD05G1241600 Malus domestica HOM05D000071 ORTHO05D000029 2.7e-07 60.8 111 36.9
Prupe.4G123100 Prunus persica HOM05D000071 ORTHO05D000029 2.7e-07 60.8 413 53.0
PGR083G2557 Punica granatum HOM05D000071 ORTHO05D000029 2.7e-07 60.8 231 41.1
QL93p0310_0029 Quercus lobata HOM05D000071 ORTHO05D000029 2.7e-07 60.8 265 39.6
Dinv06120 Davidia involucrata HOM05D000071 ORTHO05D000029 3.5e-07 60.5 121 34.7
FAN13G2244 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.5e-07 60.5 210 46.7
FAN21G3949 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.5e-07 60.5 243 42.8
MD10G1222200 Malus domestica HOM05D000071 ORTHO05D000029 3.5e-07 60.5 408 53.7
MD10G1222500 Malus domestica HOM05D000071 ORTHO05D000029 3.5e-07 60.5 243 41.6
Duzib147G0888 Durio zibethinus HOM05D000071 ORTHO05D000029 4.5e-07 60.1 116 33.6
FvH4_3g12770 Fragaria vesca HOM05D000071 ORTHO05D000029 4.5e-07 60.1 227 43.6
MBI18_g02452_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 5.9e-07 59.7 100 41.0
Rhsim08G0050900 Rhododendron simsii HOM05D000071 ORTHO05D000029 5.9e-07 59.7 240 41.7
RcHm_v2.0_Chr5g0022591 Rosa chinensis HOM05D000071 ORTHO05D000029 5.9e-07 59.7 240 42.9
FAN04G0600 Fragaria x ananassa HOM05D000071 ORTHO05D000029 7.7e-07 59.3 109 36.7
FAN25G0116 Fragaria x ananassa HOM05D000071 ORTHO05D000029 7.7e-07 59.3 217 45.6
Prupe.4G121900 Prunus persica HOM05D000071 ORTHO05D000029 7.7e-07 59.3 106 34.9
CSS0006363 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.0e-06 58.9 223 43.5
FAN04G2742 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.0e-06 58.9 109 35.8
FAN11G1089 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.0e-06 58.9 230 40.0
Rhsim08G0051000 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.0e-06 58.9 251 41.0
FvH4_3g12742 Fragaria vesca HOM05D000071 ORTHO05D000029 1.3e-06 58.5 246 40.7
FAN25G2411 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.3e-06 58.5 255 40.0
Lj3g0020164 Lotus japonicus HOM05D000071 ORTHO05D000029 1.3e-06 58.5 239 43.1
MD05G1246500 Malus domestica HOM05D000071 ORTHO05D000029 1.3e-06 58.5 55 52.7
MD05G1246400 Malus domestica HOM05D000071 ORTHO05D000029 1.7e-06 58.2 55 52.7
Prupe.4G116900 Prunus persica HOM05D000071 ORTHO05D000029 2.3e-06 57.8 231 41.6
COL.COLO4_20361 Corchorus olitorius HOM05D000071 ORTHO05D000029 2.9e-06 57.4 110 33.6
FAN11G1904 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.9e-06 57.4 394 55.1
FAN11G2193 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.9e-06 57.4 247 40.5
Thecc.02G306800 Theobroma cacao HOM05D000071 ORTHO05D000029 2.9e-06 57.4 110 34.5
Thecc.06G139000 Theobroma cacao HOM05D000071 ORTHO05D000029 2.9e-06 57.4 217 44.7
Aqoxy3G01095 Aquilegia oxysepala HOM05D000071 ORTHO05D000029 3.8e-06 57.0 114 36.8
COL.COLO4_20365 Corchorus olitorius HOM05D000071 ORTHO05D000029 3.8e-06 57.0 110 32.7
FAN16G2153 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.8e-06 57.0 113 35.4
MD10G1228000 Malus domestica HOM05D000071 ORTHO05D000029 3.8e-06 57.0 411 52.3
RcHm_v2.0_Chr7g0219061 Rosa chinensis HOM05D000071 ORTHO05D000029 3.8e-06 57.0 422 48.6
FvH4_3g13431 Fragaria vesca HOM05D000071 ORTHO05D000029 5.0e-06 56.6 56 50.0
FvH4_3g45520 Fragaria vesca HOM05D000071 ORTHO05D000029 5.0e-06 56.6 241 40.7
Nn3g19133 Nelumbo nucifera HOM05D000071 ORTHO05D000029 5.0e-06 56.6 232 41.4
Sabra10G0046800 Salix brachista HOM05D000071 ORTHO05D000029 5.0e-06 56.6 112 31.2
FAN11G2845 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.6e-06 56.2 261 39.8
FAN16G0359 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.6e-06 56.2 232 42.2
FAN16G3241 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.6e-06 56.2 228 43.4
Hma1.2p1_0609F.1_g188370 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 6.6e-06 56.2 56 48.2
MBI17_g47920_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 6.6e-06 56.2 107 35.5
MD10G1221500 Malus domestica HOM05D000071 ORTHO05D000029 6.6e-06 56.2 113 34.5
Prupe.4G121800 Prunus persica HOM05D000071 ORTHO05D000029 6.6e-06 56.2 246 42.7
Prupe.7G040200 Prunus persica HOM05D000071 ORTHO05D000029 6.6e-06 56.2 109 33.9
QL05p023777 Quercus lobata HOM05D000071 ORTHO05D000029 6.6e-06 56.2 217 42.4
RcHm_v2.0_Chr3g0480881 Rosa chinensis HOM05D000071 ORTHO05D000029 6.6e-06 56.2 219 42.0
QL05p024141 Quercus lobata HOM05D000071 ORTHO05D000029 8.6e-06 55.8 223 43.9
RcHm_v2.0_Chr6g0275331 Rosa chinensis HOM05D000071 ORTHO05D000029 8.6e-06 55.8 251 39.8


User provided reference genes

Program Settings