Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 3.5e-83 311.6 161 100.0
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.2e-62 243.4 155 84.5
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 4.8e-40 168.3 131 70.2
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 4.0e-39 165.2 122 71.3
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 4.5e-38 161.8 146 63.7
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 4.5e-38 161.8 93 86.0
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 1.3e-37 160.2 123 68.3
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 2.2e-37 159.5 114 71.9
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.2e-37 159.5 142 65.5
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.2e-37 159.5 132 68.2
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 2.9e-37 159.1 101 78.2
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 4.9e-37 158.3 98 81.6
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 4.9e-37 158.3 149 59.7
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 6.5e-37 157.9 160 56.9
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 6.5e-37 157.9 157 56.7
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.9e-36 156.4 130 64.6
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 1.9e-36 156.4 93 78.5
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 3.2e-36 155.6 93 84.9
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 3.2e-36 155.6 111 73.0
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 3.2e-36 155.6 144 63.9
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 5.5e-36 154.8 131 64.1
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 5.5e-36 154.8 137 62.0
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 7.1e-36 154.5 93 81.7
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 7.1e-36 154.5 149 59.1
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 7.1e-36 154.5 161 56.5
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 9.3e-36 154.1 139 58.3
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 9.3e-36 154.1 119 66.4
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 9.3e-36 154.1 93 79.6
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 9.3e-36 154.1 94 78.7
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 9.3e-36 154.1 146 57.5
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.1e-35 152.9 119 64.7
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 2.1e-35 152.9 107 71.0
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 2.1e-35 152.9 147 56.5
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 2.1e-35 152.9 155 54.8
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 2.1e-35 152.9 175 54.9
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 2.7e-35 152.5 93 79.6
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 2.7e-35 152.5 93 79.6
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 2.7e-35 152.5 93 79.6
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.7e-35 152.5 94 78.7
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.7e-35 152.5 117 65.8
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 2.7e-35 152.5 145 60.0
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 2.7e-35 152.5 93 79.6
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 3.5e-35 152.1 93 78.5
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 3.5e-35 152.1 93 78.5
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.6e-35 151.8 93 77.4
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.6e-35 151.8 93 77.4
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 4.6e-35 151.8 93 80.6
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 4.6e-35 151.8 153 55.6
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 4.6e-35 151.8 103 69.9
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 7.9e-35 151.0 113 66.4
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.3e-34 150.2 128 62.5
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.3e-34 150.2 93 78.5
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 1.3e-34 150.2 119 64.7
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.8e-34 149.8 113 68.1
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.8e-34 149.8 113 68.1
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 1.8e-34 149.8 157 56.1
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 3.9e-34 148.7 93 75.3
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.1e-34 148.3 103 68.9
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 5.1e-34 148.3 93 76.3
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 6.7e-34 147.9 158 54.4
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 6.7e-34 147.9 140 55.0
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 8.7e-34 147.5 107 71.0
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 8.7e-34 147.5 120 62.5
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.1e-33 147.1 128 58.6
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.1e-33 147.1 119 63.0
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.5e-33 146.7 93 75.3
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.9e-33 146.4 123 62.6
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.5e-33 146.0 176 49.4
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 3.3e-33 145.6 118 62.7
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 5.7e-33 144.8 121 60.3
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 5.7e-33 144.8 117 62.4
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 5.7e-33 144.8 130 60.8
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 9.7e-33 144.1 167 48.5
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.6e-32 143.3 172 48.3
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-32 142.9 172 48.3
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 4.8e-32 141.7 114 66.7
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 4.8e-32 141.7 114 66.7
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 6.3e-32 141.4 143 55.9
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 8.2e-32 141.0 143 55.9
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 3.1e-31 139.0 123 60.2
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 4.1e-31 138.7 93 72.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 5.3e-31 138.3 150 54.7
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.9e-31 137.9 93 73.1
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.5e-30 136.7 109 64.2
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.7e-29 133.3 93 69.9
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.7e-29 133.3 146 55.5
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 2.1e-27 126.3 78 78.2
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 2.1e-27 126.3 63 98.4
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 3.0e-26 122.5 76 81.6
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 8.8e-26 120.9 82 68.3
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.5e-25 120.2 71 78.9
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 5.7e-25 118.2 107 57.0
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.7e-24 116.7 124 53.2
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 1.5e-22 110.2 89 66.3
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 3.4e-22 109.0 64 79.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-21 106.3 62 80.6
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.1e-19 98.2 62 74.2
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 7.9e-19 97.8 58 74.1
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 1.4e-18 97.1 145 40.7


User provided reference genes

Program Settings