Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 4.5e-57 224.2 99 100.0
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 8.8e-45 183.3 99 76.8
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 1.2e-44 183.0 100 76.0
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 1.2e-44 183.0 99 76.8
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 2.0e-44 182.2 100 77.0
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 9.8e-44 179.9 100 75.0
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 1.7e-43 179.1 99 72.7
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 2.2e-43 178.7 99 72.7
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.7e-43 177.9 100 74.0
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 6.3e-43 177.2 99 72.7
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 6.3e-43 177.2 99 71.7
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 1.4e-42 176.0 99 73.7
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.1e-42 174.9 100 72.0
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 4.1e-42 174.5 100 72.0
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 4.1e-42 174.5 99 70.7
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 5.4e-42 174.1 98 73.5
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 7.0e-42 173.7 99 72.7
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 1.2e-41 172.9 100 72.0
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 1.2e-41 172.9 100 72.0
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.2e-41 172.9 99 70.7
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 2.0e-41 172.2 100 73.0
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 2.0e-41 172.2 100 72.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 2.7e-41 171.8 97 70.1
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 2.7e-41 171.8 100 72.0
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 3.5e-41 171.4 100 70.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 3.5e-41 171.4 100 70.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 3.5e-41 171.4 100 70.0
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 3.5e-41 171.4 99 71.7
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 3.5e-41 171.4 100 72.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 3.5e-41 171.4 100 72.0
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 4.5e-41 171.0 99 70.7
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 5.9e-41 170.6 99 68.7
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 5.9e-41 170.6 99 68.7
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 5.9e-41 170.6 100 71.0
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 5.9e-41 170.6 100 71.0
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 5.9e-41 170.6 100 71.0
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 1.3e-40 169.5 99 69.7
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.3e-40 169.5 100 72.0
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 1.3e-40 169.5 99 69.7
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 1.7e-40 169.1 100 70.0
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 2.3e-40 168.7 99 69.7
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 2.3e-40 168.7 99 69.7
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 2.9e-40 168.3 98 71.4
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 2.9e-40 168.3 100 71.0
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 2.9e-40 168.3 100 70.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 3.8e-40 167.9 100 70.0
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.8e-40 167.9 100 70.0
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 5.0e-40 167.5 98 71.4
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 6.5e-40 167.2 99 68.7
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 6.5e-40 167.2 100 71.0
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 6.5e-40 167.2 100 69.0
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 8.6e-40 166.8 99 68.7
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 8.6e-40 166.8 99 68.7
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 8.6e-40 166.8 99 68.7
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 8.6e-40 166.8 99 68.7
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 8.6e-40 166.8 99 68.7
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 8.6e-40 166.8 99 68.7
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.1e-39 166.4 100 70.0
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.9e-39 165.6 100 70.0
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 1.9e-39 165.6 100 71.0
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.9e-39 165.6 100 71.0
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 2.5e-39 165.2 99 67.7
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 5.5e-39 164.1 100 67.0
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 9.5e-39 163.3 97 69.1
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 1.6e-38 162.5 99 67.7
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 2.1e-38 162.2 100 70.0
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 3.6e-38 161.4 99 63.6
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 6.1e-38 160.6 98 68.4
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 1.0e-37 159.8 100 64.0
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 1.0e-37 159.8 95 70.5
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 6.8e-37 157.1 100 65.0
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 6.8e-37 157.1 99 64.6
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 6.8e-37 157.1 99 64.6
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 3.4e-36 154.8 100 63.0
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 9.8e-36 153.3 98 63.3
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 1.7e-35 152.5 98 65.3
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 3.7e-35 151.4 100 64.0
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 6.3e-35 150.6 98 62.2
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 8.3e-35 150.2 88 71.6
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 8.3e-35 150.2 100 64.0
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 7.0e-34 147.1 85 72.9
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.3e-32 142.9 99 56.6
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 1.3e-32 142.9 99 63.6
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.7e-32 142.5 99 56.6
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 5.0e-32 141.0 98 63.3
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 1.1e-31 139.8 87 64.4
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 1.9e-31 139.0 134 49.3
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 1.0e-29 133.3 110 53.6
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 3.0e-29 131.7 169 39.1
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 4.0e-29 131.3 100 58.0
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 4.0e-29 131.3 100 58.0
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.7e-27 125.9 99 54.5
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 2.0e-25 119.0 67 73.1
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 4.3e-23 111.3 101 53.5
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 6.4e-19 97.4 101 50.5
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 4.1e-18 94.7 102 50.0
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 9.2e-18 93.6 58 67.2
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.8e-13 79.3 100 41.0
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 9.2e-10 67.0 37 73.0
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 2.3e-08 62.4 31 80.6
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.9e-08 61.6 40 62.5
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 5.6e-07 57.8 88 36.4


User provided reference genes

Program Settings