Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 9.2e-254 879.8 461 100.0
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 1.7e-244 849.0 461 95.9
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 4.0e-233 811.2 461 91.3
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 1.4e-230 802.7 461 90.0
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 1.2e-197 693.3 473 76.5
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 5.1e-196 688.0 463 77.5
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 5.7e-195 684.5 472 75.0
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 1.1e-193 680.2 474 75.7
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 1.8e-193 679.5 451 77.8
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 5.3e-193 677.9 463 76.7
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 9.1e-193 677.2 451 77.2
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 1.5e-192 676.4 470 76.4
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 1.0e-191 673.7 451 77.2
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 5.0e-191 671.4 473 73.8
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 5.0e-191 671.4 463 76.7
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 6.5e-191 671.0 452 77.2
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 1.1e-190 670.2 459 75.8
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 1.4e-190 669.8 476 73.7
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 4.2e-190 668.3 459 76.9
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 4.2e-190 668.3 466 75.3
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 5.5e-190 667.9 461 75.3
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 5.5e-190 667.9 473 74.6
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 3.6e-189 665.2 473 73.6
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 3.6e-189 665.2 466 75.1
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 4.7e-189 664.8 448 76.1
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 4.7e-189 664.8 452 76.5
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 6.1e-189 664.5 467 75.6
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 7.9e-189 664.1 474 74.7
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 2.3e-188 662.5 466 74.2
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 5.1e-188 661.4 470 74.3
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 6.7e-188 661.0 449 75.9
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 3.3e-187 658.7 463 74.9
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 5.7e-187 657.9 444 75.2
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 1.3e-186 656.8 461 73.5
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 2.8e-186 655.6 462 74.7
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 3.7e-186 655.2 446 75.8
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 6.3e-186 654.4 473 71.5
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 8.2e-186 654.1 472 72.0
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 8.2e-186 654.1 467 72.6
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.1e-185 653.7 471 72.8
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 1.1e-185 653.7 459 73.0
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 1.1e-185 653.7 472 72.5
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 1.4e-185 653.3 467 71.9
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 2.4e-185 652.5 440 76.6
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 3.1e-185 652.1 436 76.1
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 1.6e-184 649.8 461 73.8
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 2.0e-184 649.4 449 75.1
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 2.6e-184 649.0 487 70.2
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 3.5e-184 648.7 438 77.9
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 3.5e-184 648.7 443 75.2
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 1.3e-183 646.7 473 72.5
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 8.5e-183 644.0 431 75.6
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 8.5e-183 644.0 473 72.3
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.5e-182 643.3 474 71.9
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 3.2e-182 642.1 474 71.7
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 4.2e-182 641.7 473 72.1
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 5.5e-182 641.3 444 75.7
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 3.6e-181 638.6 503 68.8
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 6.1e-181 637.9 474 71.1
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 1.8e-180 636.3 469 70.6
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 1.8e-180 636.3 472 71.2
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 4.0e-180 635.2 461 70.9
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 5.2e-180 634.8 461 70.7
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 5.2e-180 634.8 461 70.7
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 5.2e-180 634.8 461 70.9
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 1.1e-179 633.6 461 70.7
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 1.1e-179 633.6 461 70.7
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 1.1e-179 633.6 460 70.9
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 1.5e-179 633.3 469 70.4
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 2.0e-179 632.9 462 70.3
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 3.3e-179 632.1 461 70.5
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 7.5e-179 630.9 467 70.4
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 1.3e-178 630.2 459 71.7
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 2.2e-178 629.4 435 74.3
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 2.2e-178 629.4 459 70.8
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 6.3e-178 627.9 461 70.5
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 8.2e-178 627.5 461 70.9
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 1.1e-177 627.1 473 69.6
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 1.1e-177 627.1 463 70.2
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 1.8e-177 626.3 459 71.0
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 2.0e-176 622.9 464 70.3
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 3.5e-176 622.1 480 69.0
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 5.9e-176 621.3 453 72.8
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 1.7e-175 619.8 446 72.4
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 1.7e-175 619.8 459 71.0
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 3.8e-175 618.6 487 66.9
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 1.5e-174 616.7 401 78.8
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 4.7e-173 611.7 491 67.8
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 8.8e-172 607.4 461 70.9
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 1.1e-169 600.5 448 69.2
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 9.1e-169 597.4 408 75.2
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 3.5e-168 595.5 474 66.2
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 5.9e-168 594.7 422 75.8
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 2.3e-164 582.8 439 69.5
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 5.7e-163 578.2 552 58.9
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 1.3e-162 577.0 425 72.2
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 1.1e-161 573.9 422 71.6
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 3.5e-160 568.9 424 68.4
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 7.7e-160 567.8 398 75.4
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 2.3e-156 556.2 426 67.1
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 5.4e-153 545.0 461 64.6
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 8.6e-151 537.7 434 65.4
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 3.3e-150 535.8 405 71.6
HPP92_001489 Vanilla planifolia HOM05D004269 ORTHO05D007106 3.3e-150 535.8 388 70.1
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 2.8e-149 532.7 446 63.2
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.6e-136 490.3 476 59.5
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 1.2e-133 480.7 436 58.5
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 2.1e-133 479.9 347 74.6
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis HOM05D004269 ORTHO05D007106 7.3e-126 454.9 362 66.0
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 2.1e-125 453.4 401 63.6
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 3.1e-124 449.5 437 57.7
Zm00001eb012670 Zea mays HOM05D004269 ORTHO05D007106 2.3e-119 433.3 331 66.8
MCO14G482 Micromonas commoda HOM05D004269 ORTHO05D007106 8.7e-119 431.4 436 55.3
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 4.0e-116 422.5 324 71.3
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 2.1e-101 373.6 253 76.7
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 6.2e-101 372.1 388 56.4
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.1e-84 318.2 241 71.4
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 6.7e-79 298.9 236 69.1
Actinidia13127 Actinidia chinensis HOM05D004269 ORTHO05D007106 6.9e-76 288.9 204 74.5
Hma1.2p1_1535F.1_g289480 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.4e-73 281.2 197 74.1
Hma1.2p1_1004F.1_g246860 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 5.9e-67 259.2 206 67.5
VMungo0720G1280 Vigna mungo HOM05D004269 ORTHO05D007106 8.5e-66 255.4 147 83.7
CBR_g37471 Chara braunii HOM05D004269 ORTHO05D007106 8.0e-64 248.8 220 60.9
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 2.0e-59 234.2 182 71.4
Cfa024613 Carpinus fangiana HOM05D004269 ORTHO05D007106 4.4e-54 216.5 477 35.2
SEGI_16124 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 6.3e-45 186.0 124 71.0
SEGI_30751 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 2.5e-33 147.5 142 62.0
SEGI_32622 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 4.3e-33 146.7 139 62.6
Cc02_g24250 Coffea canephora HOM05D004269 ORTHO05D007106 3.1e-31 140.6 102 68.6
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 4.4e-30 136.7 117 59.8
SEGI_12229 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 4.4e-30 136.7 118 59.3
QL09p013305 Quercus lobata HOM05D004269 ORTHO05D010618 3.7e-29 133.7 101 69.3
Lsat_1_v5_gn_7_20760 Lactuca sativa HOM05D004269 ORTHO05D020149 4.9e-29 133.3 160 55.0
Lsat_1_v5_gn_4_171201 Lactuca sativa HOM05D004269 ORTHO05D000661 2.4e-28 131.0 266 38.7
Lsat_1_v5_gn_6_110780 Lactuca sativa HOM05D004269 ORTHO05D000661 1.5e-25 121.7 266 36.8
Cfa017427 Carpinus fangiana HOM05D004269 ORTHO05D021565 1.1e-23 115.5 106 59.4
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 2.5e-17 94.4 87 55.2
Lsat_1_v5_gn_1_18180 Lactuca sativa HOM05D000819 ORTHO05D000661 2.1e-16 91.3 120 52.5
C02p59220 Brassica napus HOM05D004269 ORTHO05D013520 6.8e-15 86.3 90 53.3
BcaC01g04800 Brassica carinata HOM05D004269 ORTHO05D013520 1.5e-14 85.1 119 45.4
C05p46330 Brassica napus HOM05D004269 ORTHO05D013520 2.0e-14 84.7 147 38.8
C01p38510 Brassica napus HOM05D004269 ORTHO05D013520 4.4e-14 83.6 119 44.5
C04p14230 Brassica napus HOM05D004269 ORTHO05D013520 4.4e-14 83.6 119 44.5
BolC5t30237H Brassica oleracea HOM05D004269 ORTHO05D013520 4.4e-14 83.6 119 44.5
C02p38620 Brassica napus HOM05D004269 ORTHO05D013520 5.8e-14 83.2 119 44.5
AUR62004247 Chenopodium quinoa HOM05D004269 ORTHO05D021565 5.8e-14 83.2 57 70.2
AUR62035732 Chenopodium quinoa HOM05D004269 ORTHO05D021565 5.8e-14 83.2 57 70.2
BolC5t33714H Brassica oleracea HOM05D004269 ORTHO05D013520 7.6e-14 82.8 119 44.5
BcaC05g28037 Brassica carinata HOM05D004269 ORTHO05D013520 1.7e-13 81.6 124 42.7
C07p30140 Brassica napus HOM05D004269 ORTHO05D013520 8.4e-13 79.3 104 46.2
BolC5t33363H Brassica oleracea HOM05D004269 ORTHO05D013520 8.4e-13 79.3 108 45.4
Lsat_1_v5_gn_1_104560 Lactuca sativa HOM05D001098 ORTHO05D003515 8.4e-13 79.3 46 76.1
Lsat_1_v5_gn_9_124300 Lactuca sativa HOM05D001098 ORTHO05D003515 8.4e-13 79.3 46 76.1
Sabra15G0134100 Salix brachista HOM05D004269 ORTHO05D007106 1.9e-12 78.2 90 51.1
C05p40550 Brassica napus HOM05D004269 ORTHO05D013520 5.4e-12 76.6 63 63.5
BolC6t36588H Brassica oleracea HOM05D004269 ORTHO05D013520 5.4e-12 76.6 121 43.0
BcaC06g34343 Brassica carinata HOM05D004269 ORTHO05D013520 9.2e-12 75.9 58 67.2
BcaB08g34435 Brassica carinata HOM05D004269 ORTHO05D000659 4.6e-11 73.6 60 53.3
Lsat_1_v5_gn_7_15681 Lactuca sativa HOM05D004269 ORTHO05D007106 3.0e-10 70.9 166 32.5
ECA236G0058 Erigeron canadensis HOM05D000039 ORTHO05D000370 6.6e-10 69.7 63 58.7
Glyma.18G131800 Glycine max HOM05D004269 ORTHO05D213362 1.1e-09 68.9 69 56.5
COL.COLO4_35964 Corchorus olitorius HOM05D001211 ORTHO05D001084 1.5e-09 68.6 91 46.2
Lsat_1_v5_gn_3_125120 Lactuca sativa HOM05D004623 ORTHO05D005100 3.1e-07 60.8 178 30.3
BcaC04g20716 Brassica carinata HOM05D004269 ORTHO05D013520 6.9e-07 59.7 45 64.4
CAN.G1327.6 Capsicum annuum HOM05D004269 ORTHO05D007861 2.0e-06 58.2 48 62.5
CARHR249580 Cardamine hirsuta HOM05D004269 ORTHO05D021565 2.6e-06 57.8 72 44.4
C06p14100 Brassica napus HOM05D004269 ORTHO05D013520 4.4e-06 57.0 46 63.0
AUR62005065 Chenopodium quinoa HOM05D018411 ORTHO05D021565 4.4e-06 57.0 67 50.7
BcaC07g37638 Brassica carinata HOM05D004269 ORTHO05D016737 5.8e-06 56.6 39 66.7


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