Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 1.6e-68 262.7 136 100.0
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 2.1e-65 252.3 136 95.6
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 2.7e-60 235.3 136 88.2
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.8e-43 179.5 135 73.3
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 9.0e-40 167.2 140 65.7
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 9.9e-39 163.7 136 66.9
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.3e-38 163.3 104 79.8
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.3e-38 163.3 139 64.7
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 2.2e-38 162.5 139 64.7
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 3.8e-38 161.8 142 65.5
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 6.4e-38 161.0 104 79.8
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 2.4e-37 159.1 96 82.3
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 4.2e-37 158.3 146 65.1
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 4.2e-37 158.3 142 63.4
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 5.5e-37 157.9 140 62.9
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 5.5e-37 157.9 99 78.8
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 7.1e-37 157.5 138 63.8
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 9.3e-37 157.1 138 66.7
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 9.3e-37 157.1 94 84.0
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 9.3e-37 157.1 135 64.4
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 1.6e-36 156.4 93 83.9
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 1.6e-36 156.4 95 82.1
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.7e-36 155.6 141 63.8
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 2.7e-36 155.6 126 67.5
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 3.5e-36 155.2 110 71.8
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 6.0e-36 154.5 128 66.4
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 6.0e-36 154.5 128 66.4
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.0e-35 153.7 135 63.0
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.0e-35 153.7 129 65.9
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 1.0e-35 153.7 128 65.6
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 1.3e-35 153.3 136 64.7
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.8e-35 152.9 128 66.4
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.8e-35 152.9 136 63.2
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 2.3e-35 152.5 100 76.0
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 2.3e-35 152.5 106 75.5
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 2.3e-35 152.5 99 76.8
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 3.0e-35 152.1 103 74.8
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 3.0e-35 152.1 127 66.1
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 3.9e-35 151.8 143 60.1
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 3.9e-35 151.8 127 66.1
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 5.1e-35 151.4 106 70.8
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 5.1e-35 151.4 130 65.4
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 5.1e-35 151.4 93 83.9
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 5.1e-35 151.4 128 64.8
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 6.7e-35 151.0 136 62.5
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 6.7e-35 151.0 112 72.3
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 8.7e-35 150.6 127 66.1
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 8.7e-35 150.6 127 66.1
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.1e-34 150.2 94 83.0
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 1.5e-34 149.8 145 63.4
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.5e-34 149.8 137 62.8
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 1.5e-34 149.8 104 73.1
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 1.9e-34 149.4 127 65.4
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 1.9e-34 149.4 127 65.4
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.9e-34 149.4 137 62.0
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 2.5e-34 149.1 137 62.0
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.5e-34 149.1 137 62.0
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 2.5e-34 149.1 129 61.2
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 3.3e-34 148.7 136 63.2
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 3.3e-34 148.7 105 73.3
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 4.3e-34 148.3 126 64.3
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.6e-34 147.9 137 62.0
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.6e-34 147.9 137 62.0
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 5.6e-34 147.9 122 67.2
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 5.6e-34 147.9 136 64.7
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 7.4e-34 147.5 135 60.7
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 7.4e-34 147.5 87 81.6
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 7.4e-34 147.5 87 81.6
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 9.6e-34 147.1 123 68.3
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 1.3e-33 146.7 107 70.1
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.3e-33 146.7 100 75.0
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.6e-33 146.4 98 69.4
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 2.1e-33 146.0 133 63.2
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 2.1e-33 146.0 84 84.5
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 2.1e-33 146.0 136 62.5
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 2.8e-33 145.6 90 80.0
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 3.7e-33 145.2 137 62.0
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 3.7e-33 145.2 92 76.1
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 6.2e-33 144.4 127 64.6
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 8.2e-33 144.1 106 68.9
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 8.2e-33 144.1 138 59.4
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.1e-32 143.7 90 80.0
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 1.4e-32 143.3 126 66.7
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.4e-32 143.3 130 63.1
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 1.8e-32 142.9 131 61.1
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 2.4e-32 142.5 131 61.8
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 6.9e-32 141.0 132 56.8
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 9.0e-32 140.6 83 83.1
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 1.2e-31 140.2 106 67.0
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.5e-31 139.8 82 84.1
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 3.4e-31 138.7 84 77.4
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 4.5e-31 138.3 106 66.0
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 7.6e-31 137.5 82 80.5
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 7.6e-31 137.5 162 56.2
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 2.2e-30 136.0 110 67.3
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 2.9e-30 135.6 118 66.1
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 4.9e-30 134.8 83 78.3
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 4.9e-30 134.8 135 54.8
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 2.5e-29 132.5 127 59.8
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 4.2e-29 131.7 87 72.4
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.2e-28 130.2 84 76.2
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 2.8e-25 119.0 89 69.7
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 2.1e-20 102.8 131 51.9
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 2.0e-15 86.3 46 87.0
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.4e-13 80.1 84 52.4
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 4.8e-09 65.1 60 58.3
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 1.5e-07 60.1 52 65.4


User provided reference genes

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