Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G034590 Cucumis sativus L. HOM05D007574 ORTHO05D007552 3.2e-107 391.7 195 100.0
MELO3C009230.2 Cucumis melo HOM05D007574 ORTHO05D007552 6.4e-39 164.9 88 98.9
ClCG10G021430 Citrullus lanatus HOM05D007574 ORTHO05D007552 1.0e-36 157.5 87 95.4
Sed0004598 Sechium edule HOM05D007574 ORTHO05D007552 1.1e-27 127.5 87 81.6
Glyma.18G187300 Glycine max HOM05D007574 ORTHO05D007552 1.1e-22 110.9 93 65.6
TPR.G27329 Trifolium pratense HOM05D007574 ORTHO05D007552 4.3e-19 99.0 89 62.9
Glyma.07G136800 Glycine max HOM05D007574 ORTHO05D007552 7.4e-19 98.2 89 65.2
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 1.6e-18 97.1 92 64.1
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 6.2e-18 95.1 91 61.5
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 1.4e-17 94.0 94 63.8
Medtr7g063490 Medicago truncatula HOM05D007574 ORTHO05D007552 2.4e-17 93.2 87 59.8
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 3.1e-17 92.8 97 55.7
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 4.0e-17 92.4 99 54.5
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 5.3e-17 92.0 94 57.4
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 6.9e-17 91.7 103 50.5
Medtr4g021330 Medicago truncatula HOM05D007574 ORTHO05D007552 1.2e-16 90.9 89 57.3
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 1.5e-16 90.5 96 58.3
Lj1g0014408 Lotus japonicus HOM05D007574 ORTHO05D007552 2.0e-16 90.1 90 56.7
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 3.4e-16 89.4 94 59.6
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 5.8e-16 88.6 102 53.9
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 7.6e-16 88.2 89 58.4
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 7.6e-16 88.2 94 57.4
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 7.6e-16 88.2 94 59.6
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 1.3e-15 87.4 95 58.9
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 2.9e-15 86.3 98 56.1
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 4.9e-15 85.5 81 61.7
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 8.4e-15 84.7 99 53.5
Lj1g0012526 Lotus japonicus HOM05D007574 ORTHO05D007552 8.4e-15 84.7 90 53.3
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 8.4e-15 84.7 81 58.0
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 1.9e-14 83.6 91 54.9
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 1.9e-14 83.6 94 56.4
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 1.9e-14 83.6 97 52.6
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 2.4e-14 83.2 93 57.0
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 4.2e-14 82.4 100 55.0
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 4.2e-14 82.4 100 55.0
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 5.5e-14 82.0 95 52.6
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 5.5e-14 82.0 91 54.9
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 7.1e-14 81.6 95 52.6
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 7.1e-14 81.6 86 58.1
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 9.3e-14 81.3 102 48.0
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 1.2e-13 80.9 87 54.0
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 1.2e-13 80.9 103 52.4
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 1.2e-13 80.9 99 54.5
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 1.2e-13 80.9 84 57.1
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 2.7e-13 79.7 102 48.0
Lalb_Chr01g0022701 Lupinus albus HOM05D007574 ORTHO05D007552 4.6e-13 79.0 91 56.0
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 6.0e-13 78.6 86 53.5
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 1.0e-12 77.8 97 51.5
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 2.3e-12 76.6 81 60.5
Atru.chr8.2052 Acer truncatum HOM05D007574 ORTHO05D007552 3.0e-12 76.3 91 51.6
Gohir.A04G084700 Gossypium hirsutum HOM05D007574 ORTHO05D007552 3.9e-12 75.9 104 47.1
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 6.7e-12 75.1 98 52.0
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 6.7e-12 75.1 98 52.0
Lalb_Chr03g0042511 Lupinus albus HOM05D007574 ORTHO05D007552 6.7e-12 75.1 88 54.5
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 8.7e-12 74.7 92 55.4
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 1.1e-11 74.3 97 48.5
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 1.9e-11 73.6 96 52.1
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 1.9e-11 73.6 82 56.1
AUR62027719 Chenopodium quinoa HOM05D007574 ORTHO05D007552 2.5e-11 73.2 85 54.1
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 9.6e-11 71.2 86 51.2
AUR62043962 Chenopodium quinoa HOM05D007574 ORTHO05D007552 1.6e-10 70.5 83 54.2
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 3.7e-10 69.3 98 49.0
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 3.7e-10 69.3 94 45.7
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 6.2e-10 68.6 93 47.3
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 1.1e-09 67.8 86 47.7
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 9.0e-09 64.7 69 55.1
Eucgr.K03060 Eucalyptus grandis HOM05D007574 ORTHO05D007552 2.6e-08 63.2 98 44.9
EL10Ac7g17001 Beta vulgaris HOM05D007574 ORTHO05D007552 1.3e-07 60.8 92 44.6
Nitab4.5_0004744g0030 Nicotiana tabacum HOM05D007574 ORTHO05D007552 4.9e-07 58.9 80 48.8
ATR0665G027 Amborella trichopoda HOM05D007574 ORTHO05D007552 1.9e-06 57.0 92 41.3
Lsat_1_v5_gn_6_117001 Lactuca sativa HOM05D007574 ORTHO05D007552 1.9e-06 57.0 70 52.9
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 3.2e-06 56.2 61 57.4
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 4.2e-06 55.8 100 49.0
Sc01g0004620 Simmondsia chinensis HOM05D007574 ORTHO05D007552 7.1e-06 55.1 89 46.1
HPP92_019232 Vanilla planifolia HOM05D007574 ORTHO05D007552 7.1e-06 55.1 46 58.7
Migut.L01966 Erythranthe guttata HOM05D007574 ORTHO05D007552 9.3e-06 54.7 89 47.2
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 9.3e-06 54.7 100 47.0


User provided reference genes

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