Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G034020 Cucumis sativus L. HOM05D000241 ORTHO05D171880 2.7e-55 218.4 108 100.0
Sed0018095 Sechium edule HOM05D000241 ORTHO05D001001 2.1e-07 59.3 31 90.3
ClCG10G021970 Citrullus lanatus HOM05D000241 ORTHO05D001001 2.7e-07 58.9 31 90.3
arahy.Tifrunner.gnm1.ann1.CMR7WY Arachis hypogaea HOM05D000241 ORTHO05D038818 1.4e-06 56.6 41 68.3
Ciclev10012384m.g Citrus clementina HOM05D000241 ORTHO05D001001 1.8e-06 56.2 31 83.9
Gohir.A11G329000 Gossypium hirsutum HOM05D000241 ORTHO05D001001 1.8e-06 56.2 31 83.9
Gohir.D11G348000 Gossypium hirsutum HOM05D000241 ORTHO05D001001 1.8e-06 56.2 31 83.9
Gorai.007G378400 Gossypium raimondii HOM05D000241 ORTHO05D001001 1.8e-06 56.2 31 83.9
Migut.F01419 Erythranthe guttata HOM05D000241 ORTHO05D001001 3.0e-06 55.5 31 83.9
HanXRQChr07g0202481 Helianthus annuus HOM05D000241 ORTHO05D001001 3.0e-06 55.5 31 83.9
MSTRG.8316 Avicennia marina HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
CSS0002218 Camellia sinensis var. sinensis HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
CSS0002350 Camellia sinensis var. sinensis HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
CAN.G1184.2 Capsicum annuum HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Cfa001355 Carpinus fangiana HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
CiPaw.01G296500 Carya illinoinensis HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
ClCG07G004030 Citrullus lanatus HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
ClCG07G004040 Citrullus lanatus HOM05D000241 ORTHO05D040057 4.0e-06 55.1 31 80.6
Cc02_g06820 Coffea canephora HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
MELO3C000776.2 Cucumis melo HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
MELO3C025166.2 Cucumis melo HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
CsaV3_5G008940 Cucumis sativus L. HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
CsaV3_5G008950 Cucumis sativus L. HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
DCAR_011794 Daucus carota HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Duzib106G1226 Durio zibethinus HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Duzib114G0616 Durio zibethinus HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Glyma.14G061500 Glycine max HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Hma1.2p1_1409F.1_g281630 Hydrangea macrophylla HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Lalb_Chr04g0250701 Lupinus albus HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Lalb_Chr10g0105051 Lupinus albus HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Lalb_Chr17g0346641 Lupinus albus HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Nitab4.5_0000737g0120 Nicotiana tabacum HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Peaxi162Scf01313g00117 Petunia axillaris HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Phvul.008G226000 Phaseolus vulgaris HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Psat2g034560 Pisum sativum HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Rhsim03G0141200 Rhododendron simsii HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
SalBow6G0032 Salvia bowleyana HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
SalBow6G7045 Salvia bowleyana HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Sed0020480 Sechium edule HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Sed0023275 Sechium edule HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Hund15965 Selenicereus undatus HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Sc11g0007230 Simmondsia chinensis HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Sc14g0005280 Simmondsia chinensis HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Solyc03g096290.3 Solanum lycopersicum HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
Sopen03g026370 Solanum pennellii HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
PGSC0003DMG400020742 Solanum tuberosum HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
TPR.G19849 Trifolium pratense HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
TWI09G0450 Tripterygium wilfordii HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
VMungo0647G1925 Vigna mungo HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
GSVIVG01032861001 Vitis vinifera HOM05D000241 ORTHO05D001001 4.0e-06 55.1 31 80.6
arahy.Tifrunner.gnm1.ann1.XI3JWG Arachis hypogaea HOM05D000241 ORTHO05D038818 5.2e-06 54.7 31 80.6
Cfa017233 Carpinus fangiana HOM05D000241 ORTHO05D001001 5.2e-06 54.7 31 80.6
CiPaw.10G155500 Carya illinoinensis HOM05D000241 ORTHO05D001001 5.2e-06 54.7 31 80.6
COL.COLO4_14565 Corchorus olitorius HOM05D000241 ORTHO05D001001 5.2e-06 54.7 31 80.6
Haze_20973 Corylus avellana HOM05D000241 ORTHO05D001001 5.2e-06 54.7 31 80.6
MELO3C025164.2 Cucumis melo HOM05D000241 ORTHO05D001001 5.2e-06 54.7 30 80.0
Gohir.A09G164100 Gossypium hirsutum HOM05D000241 ORTHO05D001001 5.2e-06 54.7 31 80.6
Lj3g0005299 Lotus japonicus HOM05D000241 ORTHO05D001001 5.2e-06 54.7 31 80.6
Hund13836 Selenicereus undatus HOM05D000241 ORTHO05D001001 5.2e-06 54.7 30 80.0
TWI77G0436 Tripterygium wilfordii HOM05D000241 ORTHO05D001001 5.2e-06 54.7 31 80.6
AL6G53040 Arabidopsis lyrata HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
AL7G30060 Arabidopsis lyrata HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
AT4G00430 Arabidopsis thaliana HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
AT4G23400 Arabidopsis thaliana HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
BcaB01g02167 Brassica carinata HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
BcaB01g02248 Brassica carinata HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
BcaNung01442 Brassica carinata HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
A03p54270 Brassica napus HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
C07p52650 Brassica napus HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
CANSAT56G4037 Cannabis sativa HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
Carub.0007s1779 Capsella rubella HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
CARHR230740 Cardamine hirsuta HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
CARHR248520 Cardamine hirsuta HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
Duzib128G0855 Durio zibethinus HOM05D000241 ORTHO05D001001 6.7e-06 54.3 31 80.6
Thhalv10025910m.g Eutrema salsugineum HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
Thhalv10028860m.g Eutrema salsugineum HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
Gohir.D09G159600 Gossypium hirsutum HOM05D000241 ORTHO05D001001 6.7e-06 54.3 31 80.6
Gorai.006G181300 Gossypium raimondii HOM05D000241 ORTHO05D001001 6.7e-06 54.3 31 80.6
HanXRQChr14g0460021 Helianthus annuus HOM05D000241 ORTHO05D001001 6.7e-06 54.3 31 80.6
QL07p035946 Quercus lobata HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
Sp6g00460 Schrenkiella parvula HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
Sp7g21310 Schrenkiella parvula HOM05D000241 ORTHO05D001001 6.7e-06 54.3 30 80.0
TPR.G15978 Trifolium pratense HOM05D000241 ORTHO05D001001 6.7e-06 54.3 31 77.4
Glyma.18G198300 Glycine max HOM05D000241 ORTHO05D001001 8.8e-06 53.9 31 77.4
Phvul.008G106400 Phaseolus vulgaris HOM05D000241 ORTHO05D001001 8.8e-06 53.9 31 77.4
PGR044G2053 Punica granatum HOM05D000241 ORTHO05D001001 8.8e-06 53.9 31 77.4


User provided reference genes

Program Settings