Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.4e-95 352.8 168 100.0
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 5.6e-92 340.9 168 95.8
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 2.0e-89 332.4 168 92.9
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 9.6e-76 287.0 162 82.7
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.6e-75 286.2 163 82.8
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 1.4e-74 283.1 163 80.4
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.8e-74 282.7 163 82.2
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 4.0e-74 281.6 161 79.5
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 4.0e-74 281.6 161 79.5
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 1.2e-73 280.0 163 79.1
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 2.0e-73 279.3 168 77.4
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 4.5e-73 278.1 163 77.9
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 7.6e-73 277.3 163 77.3
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 7.6e-73 277.3 165 78.2
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 7.6e-73 277.3 165 78.2
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.0e-72 276.9 165 77.6
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.0e-72 276.9 168 75.0
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-72 276.6 165 78.2
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 1.3e-72 276.6 161 77.0
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 1.7e-72 276.2 163 78.5
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 2.2e-72 275.8 164 79.3
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.9e-72 275.4 161 77.6
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 3.8e-72 275.0 161 78.3
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 1.9e-71 272.7 166 74.7
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.5e-71 272.3 166 73.5
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 5.5e-71 271.2 166 72.9
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 9.3e-71 270.4 163 77.3
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.1e-70 269.2 170 74.7
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.7e-70 268.9 166 72.3
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 3.5e-70 268.5 163 77.9
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 4.6e-70 268.1 163 77.3
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 6.0e-70 267.7 163 77.9
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 1.8e-69 266.2 163 74.8
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.8e-69 266.2 166 76.5
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.8e-69 266.2 162 75.3
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.8e-69 266.2 166 73.5
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 1.5e-68 263.1 163 74.2
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 1.9e-68 262.7 163 76.7
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 2.5e-68 262.3 164 76.2
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 4.3e-68 261.5 163 72.4
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 5.7e-68 261.2 164 76.8
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 7.4e-68 260.8 163 71.2
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.3e-67 260.0 163 74.8
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.1e-67 259.2 163 73.0
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.8e-67 258.8 167 69.5
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 6.3e-67 257.7 166 71.1
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.4e-66 256.5 163 69.9
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.8e-66 256.1 163 73.0
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 3.1e-66 255.4 163 72.4
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 4.1e-66 255.0 163 71.2
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 5.3e-66 254.6 158 74.1
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 5.3e-66 254.6 167 69.5
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 6.9e-66 254.2 168 71.4
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 9.0e-66 253.8 161 70.8
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 9.0e-66 253.8 162 74.7
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 1.5e-65 253.1 164 73.8
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 3.4e-65 251.9 167 67.1
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 7.6e-65 250.8 163 71.8
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.0e-64 250.4 163 71.2
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 2.9e-64 248.8 169 72.2
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 5.0e-64 248.1 163 71.2
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 5.0e-64 248.1 163 70.6
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 6.5e-64 247.7 167 71.9
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 8.4e-64 247.3 169 69.2
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 8.4e-64 247.3 169 69.2
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 8.4e-64 247.3 163 72.4
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.1e-63 246.9 164 72.0
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 4.2e-63 245.0 161 69.6
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 4.2e-63 245.0 169 68.0
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 4.2e-63 245.0 163 71.8
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 7.2e-63 244.2 169 67.5
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.2e-62 243.4 172 68.6
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 3.5e-62 241.9 157 70.1
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 3.5e-62 241.9 164 70.7
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 4.6e-62 241.5 156 69.2
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 6.1e-62 241.1 161 68.9
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.3e-61 240.0 158 69.6
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.3e-61 240.0 161 67.1
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 2.3e-61 239.2 158 68.4
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.5e-60 235.7 162 69.8
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 5.7e-60 234.6 164 67.7
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 8.2e-59 230.7 159 69.2
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.1e-58 230.3 164 69.5
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 4.1e-58 228.4 159 64.2
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 5.3e-58 228.0 159 64.2
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 7.2e-55 217.6 137 71.5
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 3.6e-54 215.3 138 72.5
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 6.1e-54 214.5 137 70.8
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.5e-52 209.9 144 68.1
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.5e-52 209.9 170 62.9
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.4e-50 202.6 129 76.7
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 2.4e-50 202.6 165 61.2
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.1e-50 202.2 127 72.4
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 9.1e-50 200.7 158 60.8
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 2.0e-49 199.5 137 67.9
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 2.0e-49 199.5 165 61.2
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 2.6e-49 199.1 158 55.7
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 6.5e-48 194.5 161 59.6
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.7e-46 189.1 161 58.4
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 6.1e-46 188.0 167 56.9
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 6.7e-45 184.5 169 56.8
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.5e-44 183.3 118 68.6
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.1e-42 177.2 160 51.9
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.5e-41 171.8 168 54.2
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 2.9e-40 169.1 169 49.7
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 8.5e-40 167.5 160 53.1
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 4.2e-39 165.2 164 47.6
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 7.2e-39 164.5 172 51.7
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 7.2e-39 164.5 156 53.8
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 1.6e-33 146.7 143 53.1
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.5e-31 140.2 162 46.9
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.5e-31 140.2 85 76.5
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.2e-28 130.6 166 44.0
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 9.8e-28 127.5 106 60.4
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.2e-27 126.3 89 67.4
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 3.8e-24 115.5 128 49.2
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 8.0e-22 107.8 155 42.6
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 4.5e-17 92.0 51 76.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 8.9e-13 77.8 119 40.3
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.6e-12 76.3 44 77.3


User provided reference genes

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