Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 5.0e-73 277.7 143 100.0
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 4.2e-64 248.1 143 88.8
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 1.6e-63 246.1 144 88.2
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 2.6e-58 228.8 143 81.8
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 5.0e-41 171.4 136 69.9
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 9.2e-35 150.6 135 59.3
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 9.2e-35 150.6 135 60.7
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.2e-34 150.2 140 59.3
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 5.9e-34 147.9 108 72.2
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 1.0e-33 147.1 133 59.4
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 1.7e-33 146.4 140 57.9
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 4.3e-32 141.7 136 56.6
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 7.3e-32 141.0 98 69.4
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 1.2e-31 140.2 161 53.4
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.6e-31 139.8 161 53.4
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 2.1e-31 139.4 139 57.6
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 2.1e-31 139.4 137 56.2
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.8e-31 139.0 136 55.9
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 2.8e-31 139.0 131 58.8
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 3.6e-31 138.7 110 68.2
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 4.7e-31 138.3 158 53.8
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 1.4e-30 136.7 144 52.8
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.8e-30 136.3 162 51.9
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 3.0e-30 135.6 139 51.8
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 4.0e-30 135.2 139 54.7
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 5.2e-30 134.8 100 68.0
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 6.8e-30 134.4 110 69.1
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 6.8e-30 134.4 100 70.0
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.2e-29 133.7 146 49.3
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.5e-29 133.3 157 52.2
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.5e-29 133.3 139 54.0
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 1.5e-29 133.3 104 69.2
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 4.4e-29 131.7 145 53.8
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 9.8e-29 130.6 132 58.3
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 2.9e-28 129.0 131 54.2
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 4.9e-28 128.3 136 56.6
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 8.3e-28 127.5 138 53.6
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 1.8e-27 126.3 121 53.7
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 3.2e-27 125.6 148 49.3
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 7.0e-27 124.4 95 65.3
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.6e-26 123.2 136 52.9
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 4.6e-26 121.7 145 48.3
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 4.6e-26 121.7 143 49.0
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 4.6e-26 121.7 131 54.2
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 6.0e-26 121.3 133 49.6
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 7.8e-26 120.9 95 65.3
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.3e-25 120.2 150 47.3
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 2.3e-25 119.4 138 50.0
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 2.3e-25 119.4 118 54.2
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 3.9e-25 118.6 145 48.3
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 6.6e-25 117.9 117 54.7
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 8.6e-25 117.5 132 51.5
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 4.3e-24 115.2 111 57.7
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 4.3e-24 115.2 111 57.7
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 9.5e-24 114.0 112 58.9
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 1.6e-23 113.2 162 43.2
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.8e-23 112.5 111 56.8
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 8.0e-23 110.9 139 48.9
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 1.1e-22 110.5 155 43.9
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.4e-22 110.2 138 47.8
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 5.2e-22 108.2 143 49.7
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 3.4e-21 105.5 105 59.0
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 9.8e-21 104.0 104 54.8
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.3e-20 103.6 125 52.0
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.7e-20 103.2 105 55.2
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 3.7e-20 102.1 181 41.4
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 8.3e-20 100.9 141 46.8
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.1e-19 100.5 109 55.0
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.4e-19 100.1 105 54.3
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.4e-19 100.1 123 46.3
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 3.2e-19 99.0 137 44.5
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 4.1e-19 98.6 100 55.0
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 5.4e-19 98.2 109 53.2
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 7.0e-19 97.8 156 43.6
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 9.2e-19 97.4 106 53.8
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.2e-18 97.1 105 53.3
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 2.7e-18 95.9 105 55.2
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 3.9e-17 92.0 106 50.9
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 3.9e-17 92.0 106 52.8
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 3.9e-17 92.0 134 45.5
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 3.9e-17 92.0 126 48.4
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 2.5e-16 89.4 139 42.4
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 9.5e-16 87.4 107 52.3
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 3.6e-15 85.5 112 46.4
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 6.2e-15 84.7 112 46.4
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 8.1e-15 84.3 107 51.4
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 4.0e-14 82.0 133 41.4
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 4.0e-14 82.0 133 41.4
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 5.2e-14 81.6 108 46.3
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.7e-12 76.6 129 40.3
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.4e-11 73.6 123 39.8
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 2.4e-11 72.8 112 42.9
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.4e-11 72.8 117 38.5
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.4e-11 71.6 104 47.1
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 7.1e-11 71.2 81 43.2
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.1e-10 69.7 96 46.9
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.1e-09 65.1 122 34.4
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 4.7e-07 58.5 108 32.4
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 8.1e-07 57.8 47 53.2
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 2.4e-06 56.2 128 36.7
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 4.0e-06 55.5 141 31.9
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 5.2e-06 55.1 90 41.1
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 8.9e-06 54.3 102 37.3
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 8.9e-06 54.3 102 37.3


User provided reference genes

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