Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G027200 Cucumis sativus L. HOM05D000135 ORTHO05D000816 5.6e-44 181.4 165 100.0
MELO3C032128.2 Cucumis melo HOM05D000135 ORTHO05D000816 2.6e-25 119.4 74 90.5
Sed0017027 Sechium edule HOM05D000135 ORTHO05D000816 2.5e-20 102.8 71 73.2
ClCG05G013360 Citrullus lanatus HOM05D000135 ORTHO05D000816 4.0e-18 95.5 74 68.9
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 5.1e-13 78.6 74 54.1
Eucgr.J02318 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.3e-12 75.9 74 55.4
Psat3g176000 Pisum sativum HOM05D000135 ORTHO05D000816 4.3e-12 75.5 74 50.0
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 1.6e-11 73.6 74 51.4
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 8.1e-11 71.2 74 47.3
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 8.1e-11 71.2 74 47.3
Rhsim08G0044100 Rhododendron simsii HOM05D000135 ORTHO05D000816 1.1e-10 70.9 74 51.4
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 1.4e-10 70.5 68 54.4
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 4.0e-10 68.9 74 48.6
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 4.0e-10 68.9 74 50.0
TPR.G38330 Trifolium pratense HOM05D000135 ORTHO05D000816 4.0e-10 68.9 74 45.9
Lalb_Chr22g0360481 Lupinus albus HOM05D000135 ORTHO05D000816 5.3e-10 68.6 74 48.6
Haze_14848 Corylus avellana HOM05D000135 ORTHO05D000816 6.9e-10 68.2 68 51.5
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 6.9e-10 68.2 74 48.6
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 9.0e-10 67.8 68 54.4
Ca_28119_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.2e-09 67.4 71 50.7
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 1.2e-09 67.4 74 48.6
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.2e-09 67.4 74 48.6
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 1.2e-09 67.4 74 44.6
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 1.5e-09 67.0 74 51.4
Medtr6g023460 Medicago truncatula HOM05D000135 ORTHO05D000816 3.4e-09 65.9 74 48.6
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 4.5e-09 65.5 68 51.5
Hma1.2p1_1219F.1_g267940 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 4.5e-09 65.5 74 48.6
QL02p016429 Quercus lobata HOM05D000135 ORTHO05D000816 4.5e-09 65.5 67 50.7
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 7.6e-09 64.7 74 44.6
Lj1g0014603 Lotus japonicus HOM05D000135 ORTHO05D000816 7.6e-09 64.7 77 46.8
Lalb_Chr14g0363211 Lupinus albus HOM05D000135 ORTHO05D000816 1.0e-08 64.3 68 50.0
Phvul.001G095600 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 1.0e-08 64.3 74 45.9
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 1.3e-08 63.9 74 47.3
QL02p016421 Quercus lobata HOM05D000135 ORTHO05D000816 1.7e-08 63.5 67 49.3
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 1.7e-08 63.5 74 47.3
unitig_748.g7057 Utricularia gibba HOM05D000135 ORTHO05D000816 2.2e-08 63.2 74 47.3
Actinidia05909 Actinidia chinensis HOM05D000135 ORTHO05D000816 3.8e-08 62.4 74 44.6
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.5e-08 61.6 74 44.6
Rhsim10G0008000 Rhododendron simsii HOM05D000135 ORTHO05D000816 6.5e-08 61.6 72 47.2
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.4e-08 61.2 68 50.0
MBI03_g33916_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 8.4e-08 61.2 75 44.0
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 8.4e-08 61.2 49 59.2
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 8.4e-08 61.2 49 59.2
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 1.1e-07 60.8 68 50.0
VMungo0464G1988 Vigna mungo HOM05D000135 ORTHO05D000816 1.1e-07 60.8 74 45.9
CSS0033756 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000816 1.4e-07 60.5 67 49.3
HanXRQChr09g0245721 Helianthus annuus HOM05D000135 ORTHO05D000816 1.9e-07 60.1 74 43.2
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 1.9e-07 60.1 74 47.3
Oeu011957.1 Olea europaea HOM05D000135 ORTHO05D000816 1.9e-07 60.1 76 46.1
Rhsim10G0007700 Rhododendron simsii HOM05D000135 ORTHO05D000816 1.9e-07 60.1 72 45.8
Rhsim10G0007900 Rhododendron simsii HOM05D000135 ORTHO05D000816 1.9e-07 60.1 72 45.8
TWI12G0256 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 1.9e-07 60.1 48 58.3
CANSAT64G0052 Cannabis sativa HOM05D000135 ORTHO05D000816 2.5e-07 59.7 74 43.2
HanXRQChr12g0372341 Helianthus annuus HOM05D000135 ORTHO05D000816 2.5e-07 59.7 74 40.5
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 3.2e-07 59.3 50 58.0
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.2e-07 59.3 68 48.5
SalBow1G2517 Salvia bowleyana HOM05D016915 ORTHO05D000816 3.2e-07 59.3 49 57.1
SalBow7G4752 Salvia bowleyana HOM05D016915 ORTHO05D000816 3.2e-07 59.3 49 57.1
TAR629G1517 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.2e-07 59.3 74 51.4
TPR.G39344 Trifolium pratense HOM05D000135 ORTHO05D000816 4.2e-07 58.9 48 60.4
Duzib264G0451 Durio zibethinus HOM05D000135 ORTHO05D000816 5.5e-07 58.5 48 56.2
Duzib264G0910 Durio zibethinus HOM05D000135 ORTHO05D000816 5.5e-07 58.5 48 56.2
HanXRQChr15g0474941 Helianthus annuus HOM05D000135 ORTHO05D000816 5.5e-07 58.5 74 45.9
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 5.5e-07 58.5 67 46.3
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 7.1e-07 58.2 48 58.3
Oeu058772.1 Olea europaea HOM05D000135 ORTHO05D000816 7.1e-07 58.2 79 44.3
Sc07g0004160 Simmondsia chinensis HOM05D000135 ORTHO05D000816 7.1e-07 58.2 70 47.1
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 9.3e-07 57.8 74 44.6
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 9.3e-07 57.8 74 44.6
Lsat_1_v5_gn_4_185301 Lactuca sativa HOM05D000135 ORTHO05D000816 9.3e-07 57.8 74 41.9
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 9.3e-07 57.8 67 46.3
Peaxi162Scf00700g00017 Petunia axillaris HOM05D000135 ORTHO05D000816 1.2e-06 57.4 74 41.9
Phvul.004G055200 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 1.2e-06 57.4 69 46.4
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 1.2e-06 57.4 74 44.6
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 1.2e-06 57.4 49 55.1
PGSC0003DMG400013427 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.2e-06 57.4 68 41.2
GSVIVG01010385001 Vitis vinifera HOM05D000135 ORTHO05D000816 1.2e-06 57.4 63 46.0
MSTRG.3087 Avicennia marina HOM05D000135 ORTHO05D000816 1.6e-06 57.0 74 43.2
EL10Ac2g03275 Beta vulgaris HOM05D000135 ORTHO05D000816 1.6e-06 57.0 65 44.6
Ciclev10018267m.g Citrus clementina HOM05D000135 ORTHO05D000816 1.6e-06 57.0 47 57.4
Migut.K01451 Erythranthe guttata HOM05D000135 ORTHO05D000816 1.6e-06 57.0 49 53.1
Migut.K01452 Erythranthe guttata HOM05D016915 ORTHO05D000816 1.6e-06 57.0 49 55.1
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 1.6e-06 57.0 68 47.1
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.6e-06 57.0 74 43.2
Lsat_1_v5_gn_8_148521 Lactuca sativa HOM05D000135 ORTHO05D000816 1.6e-06 57.0 68 44.1
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 1.6e-06 57.0 49 55.1
Cfa021347 Carpinus fangiana HOM05D000135 ORTHO05D000816 2.1e-06 56.6 50 58.0
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.1e-06 56.6 74 43.2
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.1e-06 56.6 74 43.2
Lsat_1_v5_gn_8_148641 Lactuca sativa HOM05D000135 ORTHO05D000816 2.1e-06 56.6 74 43.2
MBI02_g10682_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 2.1e-06 56.6 70 45.7
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 2.1e-06 56.6 67 46.3
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.1e-06 56.6 67 46.3
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 2.1e-06 56.6 67 46.3
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.1e-06 56.6 67 46.3
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 2.1e-06 56.6 67 44.8
CANSAT25G2687 Cannabis sativa HOM05D000135 ORTHO05D000816 2.7e-06 56.2 67 44.8
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 2.7e-06 56.2 63 46.0
Migut.K01450 Erythranthe guttata HOM05D000135 ORTHO05D000816 2.7e-06 56.2 49 55.1
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.7e-06 56.2 67 46.3
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.7e-06 56.2 67 46.3
Cpa.g.sc171.33 Carica papaya HOM05D000135 ORTHO05D000816 3.5e-06 55.8 82 40.2
Cc07_g00660 Coffea canephora HOM05D000135 ORTHO05D000816 3.5e-06 55.8 48 56.2
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.5e-06 55.8 67 46.3
Rhsim10G0007800 Rhododendron simsii HOM05D000135 ORTHO05D000816 3.5e-06 55.8 72 44.4
Sopen02g038650 Solanum pennellii HOM05D000135 ORTHO05D000816 3.5e-06 55.8 74 39.2
Hma1.2p1_1219F.1_g267950 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 4.6e-06 55.5 74 44.6
Lj2C97T4 Lonicera japonica HOM05D000135 ORTHO05D000816 4.6e-06 55.5 67 49.3
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 4.6e-06 55.5 68 45.6
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 4.6e-06 55.5 67 44.8
Sopen03g001050 Solanum pennellii HOM05D000135 ORTHO05D000816 4.6e-06 55.5 67 40.3
vmacro05944 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 4.6e-06 55.5 72 44.4
GSVIVG01010383001 Vitis vinifera HOM05D000135 ORTHO05D000816 4.6e-06 55.5 42 59.5
Aqoxy5G00935 Aquilegia oxysepala HOM05D000135 ORTHO05D000816 6.0e-06 55.1 73 42.5
CAN.G473.85 Capsicum annuum HOM05D000135 ORTHO05D000816 6.0e-06 55.1 74 37.8
CiPaw.05G177200 Carya illinoinensis HOM05D000135 ORTHO05D000816 6.0e-06 55.1 65 43.1
AUR62037653 Chenopodium quinoa HOM05D000135 ORTHO05D000816 6.0e-06 55.1 68 42.6
Lj2C97T3 Lonicera japonica HOM05D000135 ORTHO05D000816 6.0e-06 55.1 67 44.8
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 6.0e-06 55.1 74 47.3
GSVIVG01010378001 Vitis vinifera HOM05D000135 ORTHO05D000816 6.0e-06 55.1 42 59.5
Actinidia38214 Actinidia chinensis HOM05D000135 ORTHO05D000816 7.9e-06 54.7 74 51.4
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 7.9e-06 54.7 68 50.0
Lsat_1_v5_gn_9_1180 Lactuca sativa HOM05D000135 ORTHO05D000816 7.9e-06 54.7 74 41.9
QL02p071822 Quercus lobata HOM05D000135 ORTHO05D000816 7.9e-06 54.7 50 54.0
Solyc03g005040.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 7.9e-06 54.7 67 40.3
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 7.9e-06 54.7 67 44.8


User provided reference genes

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