Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.9e-194 681.0 363 100.0
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 2.4e-188 662.1 363 97.0
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 3.3e-174 615.1 363 89.8
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 1.2e-160 570.1 363 85.1
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 2.8e-149 532.3 362 78.2
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.5e-147 525.0 363 76.6
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.3e-146 522.7 351 78.9
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 6.5e-146 521.2 337 80.4
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 8.6e-146 520.8 377 75.3
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 9.5e-145 517.3 332 79.5
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 2.8e-144 515.8 336 80.1
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.8e-143 513.1 336 79.2
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 5.2e-143 511.5 355 75.8
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 4.4e-142 508.4 351 73.8
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 4.4e-142 508.4 357 75.1
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 4.4e-142 508.4 355 75.2
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 5.7e-142 508.1 363 73.8
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 9.8e-142 507.3 345 77.1
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.3e-141 506.9 363 74.9
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 3.7e-141 505.4 365 73.2
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 4.9e-141 505.0 363 74.4
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 1.1e-140 503.8 339 77.9
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 1.1e-140 503.8 363 73.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.4e-140 503.4 355 74.6
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.4e-140 503.4 358 75.4
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.8e-140 503.1 337 77.2
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 3.1e-140 502.3 339 77.9
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.2e-139 500.4 339 77.6
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.6e-139 500.0 367 73.3
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 1.6e-139 500.0 364 73.9
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 2.0e-139 499.6 333 76.9
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 3.5e-139 498.8 360 73.9
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 3.5e-139 498.8 363 73.6
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 3.8e-138 495.4 363 73.3
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 5.0e-138 495.0 336 75.9
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 6.6e-138 494.6 336 76.2
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 8.6e-138 494.2 337 75.1
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.1e-137 493.8 364 73.6
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.9e-137 493.0 336 76.2
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 2.5e-137 492.7 337 76.3
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 4.3e-137 491.9 336 76.2
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 2.1e-136 489.6 336 75.9
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 3.6e-136 488.8 333 76.9
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 6.1e-136 488.0 364 71.4
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 1.4e-135 486.9 336 76.2
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.8e-135 486.5 369 71.5
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 2.3e-135 486.1 346 74.3
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 2.3e-135 486.1 353 71.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 2.3e-135 486.1 332 75.6
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 3.0e-135 485.7 352 73.0
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 4.0e-135 485.3 332 75.6
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 5.2e-135 485.0 369 71.3
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 6.8e-135 484.6 336 74.4
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 1.2e-134 483.8 345 76.2
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.5e-134 483.4 354 72.0
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 1.5e-134 483.4 337 76.3
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 3.4e-134 482.3 352 73.0
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 3.4e-134 482.3 338 75.1
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 4.4e-134 481.9 355 72.1
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 4.4e-134 481.9 349 73.1
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 9.8e-134 480.7 354 72.0
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 9.8e-134 480.7 342 75.1
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.3e-133 480.3 333 73.9
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 2.2e-133 479.6 353 70.5
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 2.2e-133 479.6 353 72.8
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 6.4e-133 478.0 333 76.0
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.1e-132 477.2 335 74.0
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 1.4e-132 476.9 353 70.0
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 4.1e-132 475.3 335 73.4
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 7.8e-131 471.1 333 75.4
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 1.3e-130 470.3 353 69.7
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 2.3e-130 469.5 346 71.4
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 3.0e-130 469.2 354 70.1
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 3.9e-130 468.8 332 72.9
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 5.0e-130 468.4 353 69.4
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 5.0e-130 468.4 353 69.4
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 5.0e-130 468.4 353 69.4
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 4.3e-129 465.3 348 71.6
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 5.6e-129 464.9 354 69.8
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 9.5e-129 464.2 352 70.7
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 1.6e-128 463.4 352 70.5
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 3.1e-127 459.1 332 69.9
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 2.6e-126 456.1 340 72.1
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 3.4e-126 455.7 298 79.5
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 9.8e-126 454.1 338 72.8
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 2.7e-123 446.0 339 70.5
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 6.0e-123 444.9 350 67.1
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 1.1e-121 440.7 269 82.9
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 3.4e-118 429.1 269 81.4
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.5e-105 387.1 357 56.9
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 6.2e-104 381.7 273 74.0
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.4e-103 380.6 331 58.9
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.8e-103 380.2 371 59.6
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 3.9e-98 362.5 335 57.0
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.9e-89 333.6 213 85.9
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.4e-87 326.6 291 63.6
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 4.6e-83 312.4 245 69.4
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 8.4e-77 291.6 250 63.2
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.6e-72 277.3 272 57.4
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.8e-72 275.8 186 82.8
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.3e-72 275.4 155 93.5
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 5.0e-69 265.8 228 64.0
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 5.0e-69 265.8 353 45.3
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 1.6e-67 260.8 329 46.2
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 7.4e-65 251.9 284 48.6
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 4.2e-60 236.1 352 46.3
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.1e-57 228.0 193 63.7
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.5e-57 227.6 364 41.5
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-53 214.5 114 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 8.8e-50 201.8 169 60.4
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 2.8e-48 196.8 140 72.9
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.0e-41 174.1 148 62.2
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 5.3e-39 166.0 264 40.5
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.1e-36 158.3 91 86.8
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.5e-25 121.3 133 51.9
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 1.7e-24 117.9 66 89.4
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.3e-20 103.6 88 61.4
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 7.3e-20 102.4 57 87.7
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 6.8e-18 95.9 119 52.1
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 1.1e-12 78.6 43 90.7
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 2.8e-11 73.9 46 78.3
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 1.4e-07 61.6 41 68.3


User provided reference genes

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