Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 2.1e-214 748.8 388 100.0
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 3.9e-205 718.0 391 96.2
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 3.4e-185 651.7 390 88.5
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 6.3e-155 551.2 384 72.9
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 5.9e-153 544.7 402 69.7
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 5.5e-151 538.1 409 72.1
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.2e-151 537.7 414 67.6
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 1.0e-149 533.9 405 67.9
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.0e-149 533.9 385 71.4
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 5.2e-149 531.6 329 79.3
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 5.2e-149 531.6 393 71.5
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 1.2e-148 530.4 327 80.4
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 1.5e-148 530.0 380 72.4
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.5e-148 530.0 384 71.4
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.0e-148 529.6 400 68.0
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 5.7e-148 528.1 411 69.6
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 7.5e-148 527.7 374 73.5
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 7.5e-148 527.7 364 74.7
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 1.8e-146 523.1 395 69.1
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 2.4e-146 522.7 390 69.5
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 5.4e-146 521.5 403 71.5
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 7.0e-146 521.2 327 78.3
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 9.1e-146 520.8 325 78.2
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 1.2e-145 520.4 392 68.6
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 1.2e-145 520.4 381 70.1
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 1.6e-145 520.0 393 73.3
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.6e-145 520.0 342 75.1
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 5.9e-145 518.1 387 69.5
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 1.0e-144 517.3 386 67.6
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 1.3e-144 516.9 397 72.0
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 3.8e-144 515.4 396 68.9
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 5.0e-144 515.0 333 76.6
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 6.6e-144 514.6 330 76.1
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 1.1e-143 513.8 388 68.3
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 3.3e-143 512.3 337 75.4
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 5.5e-143 511.5 324 77.2
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 2.8e-142 509.2 393 68.4
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 8.0e-142 507.7 394 67.0
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 1.4e-141 506.9 386 69.9
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.8e-141 506.5 334 75.4
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 4.0e-141 505.4 394 66.5
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 5.2e-141 505.0 390 67.4
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 1.5e-140 503.4 395 66.6
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 2.6e-140 502.7 343 74.1
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 4.4e-140 501.9 395 66.6
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 5.7e-140 501.5 395 66.8
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 4.9e-139 498.4 334 74.0
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 4.9e-139 498.4 334 74.0
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 1.4e-138 496.9 334 74.9
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 7.0e-138 494.6 350 72.0
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.6e-137 493.4 343 72.3
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 2.0e-137 493.0 514 56.2
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 3.5e-137 492.3 332 73.5
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 1.0e-136 490.7 338 74.3
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 1.0e-136 490.7 337 74.2
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 3.3e-135 485.7 339 71.1
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 7.3e-135 484.6 328 73.2
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 2.1e-134 483.0 400 63.5
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 4.7e-134 481.9 324 71.6
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 8.0e-134 481.1 332 70.8
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 8.0e-134 481.1 379 64.6
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 2.3e-133 479.6 337 71.2
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 2.3e-133 479.6 379 64.1
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 2.3e-133 479.6 379 64.1
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 6.8e-133 478.0 324 71.3
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 2.6e-132 476.1 357 66.7
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 3.4e-132 475.7 278 82.0
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 3.4e-132 475.7 399 62.7
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 5.8e-132 474.9 380 63.4
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 5.8e-132 474.9 324 70.4
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 1.3e-131 473.8 379 63.1
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 3.7e-131 472.2 323 71.5
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 4.9e-131 471.9 323 70.9
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 6.4e-131 471.5 528 52.3
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 1.4e-130 470.3 358 67.3
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 3.2e-130 469.2 323 71.5
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 1.2e-129 467.2 332 70.5
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.6e-129 466.8 332 67.8
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 2.0e-129 466.5 332 68.4
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 6.0e-129 464.9 369 66.7
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 3.9e-128 462.2 331 68.9
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 6.6e-128 461.5 402 60.7
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 8.6e-128 461.1 329 68.1
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 4.3e-127 458.8 380 62.9
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 1.2e-126 457.2 380 62.6
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 6.2e-126 454.9 365 63.6
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 6.2e-126 454.9 365 63.6
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 4.0e-125 452.2 323 68.4
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 5.2e-125 451.8 394 62.9
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 1.2e-124 450.7 380 61.1
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 1.3e-123 447.2 324 68.8
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 1.7e-123 446.8 332 66.9
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 1.6e-121 440.3 377 65.0
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 1.7e-120 436.8 406 57.6
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 5.6e-119 431.8 332 66.0
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 2.8e-118 429.5 449 56.3
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 6.2e-118 428.3 274 85.4
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 6.8e-117 424.9 317 68.1
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.2e-116 424.1 327 67.3
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 2.9e-115 419.5 338 65.1
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 1.6e-113 413.7 426 53.1
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 4.6e-113 412.1 366 60.1
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 3.6e-110 402.5 300 64.7
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.2e-108 397.5 294 67.7
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 4.9e-107 392.1 283 67.8
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 4.2e-106 389.0 215 85.1
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 1.2e-105 387.5 292 68.2
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 5.1e-104 382.1 266 68.0
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 6.6e-104 381.7 238 77.3
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 1.5e-103 380.6 213 84.5
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 1.7e-99 367.1 265 68.3
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 9.3e-98 361.3 258 65.9
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 1.3e-96 357.5 287 70.7
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 6.2e-94 348.6 314 61.8
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.4e-93 347.4 546 41.0
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 6.9e-93 345.1 269 72.1
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 1.3e-88 330.9 196 78.6
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.8e-84 315.5 275 57.5
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.7e-83 313.9 215 71.2
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.9e-82 310.5 217 68.2
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 1.9e-79 300.4 331 53.8
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 1.7e-75 287.3 237 60.8
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 1.1e-71 274.6 248 64.9
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 4.8e-46 189.5 242 43.4
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 7.2e-42 175.6 246 37.8
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 7.5e-31 139.0 286 33.6
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.2e-25 121.7 121 53.7
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 3.6e-25 120.2 111 58.6
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 3.6e-25 120.2 176 40.3
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 1.4e-24 118.2 183 49.2
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 1.8e-24 117.9 110 59.1
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.3e-24 117.5 103 59.2
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 1.5e-23 114.8 89 66.3
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 7.5e-23 112.5 110 54.5
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.5e-23 112.5 113 53.1
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 7.5e-23 112.5 110 53.6
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.7e-22 110.2 65 78.5
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.7e-22 110.2 65 78.5
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-21 108.6 78 69.2
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.4e-21 107.5 65 73.8
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.6e-20 103.2 65 70.8
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 3.7e-14 83.6 73 61.6
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 6.4e-14 82.8 166 30.7
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 4.1e-13 80.1 165 31.5
MCO09G146 Micromonas commoda HOM05D004930 ORTHO05D270306 9.2e-13 79.0 245 27.3
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 2.0e-12 77.8 156 36.5
Cre10.g431350 Chlamydomonas reinhardtii HOM05D039848 ORTHO05D028745 3.0e-11 73.9 161 31.1
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 5.0e-11 73.2 175 33.7
CARHR054100 Cardamine hirsuta HOM05D004930 ORTHO05D006531 4.0e-08 63.5 69 49.3


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