Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 2.5e-206 721.8 365 100.0
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 9.1e-164 580.5 435 71.0
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 1.4e-135 486.9 293 87.4
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 5.8e-134 481.5 426 61.5
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 3.5e-54 216.5 330 42.1
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 3.2e-52 209.9 329 42.6
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 7.7e-46 188.7 236 45.8
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.5e-44 184.5 330 40.3
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.5e-44 184.5 313 39.0
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 4.3e-44 183.0 331 38.4
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 5.6e-44 182.6 326 38.7
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 3.6e-43 179.9 243 43.6
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 3.6e-43 179.9 294 39.5
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 8.0e-43 178.7 359 37.9
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.0e-41 174.1 410 34.1
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.6e-41 173.7 356 35.4
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 3.4e-41 173.3 327 38.2
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 4.4e-41 172.9 325 37.8
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 7.5e-41 172.2 243 43.2
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 9.8e-41 171.8 291 39.5
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 2.2e-40 170.6 385 35.8
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.9e-40 170.2 329 36.8
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 3.7e-40 169.9 324 35.8
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 3.7e-40 169.9 352 34.9
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 4.9e-40 169.5 319 39.8
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 6.4e-40 169.1 356 35.1
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 1.1e-39 168.3 332 37.7
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.8e-39 167.5 292 40.8
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.4e-39 167.2 329 35.9
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 4.1e-39 166.4 323 37.2
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 5.4e-39 166.0 330 37.0
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.0e-37 161.8 334 35.6
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 3.0e-37 160.2 329 34.3
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 3.0e-37 160.2 329 35.9
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.5e-36 157.9 294 37.1
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 2.5e-36 157.1 258 42.2
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 3.3e-36 156.8 312 36.5
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 7.3e-36 155.6 196 45.9
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 6.2e-35 152.5 326 35.6
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.4e-34 151.4 334 34.1
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 1.8e-34 151.0 222 41.9
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 3.1e-34 150.2 345 34.8
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 1.2e-33 148.3 364 35.2
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 5.8e-33 146.0 335 36.1
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.2e-30 138.3 185 42.7
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 1.6e-30 137.9 189 44.4
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 2.0e-30 137.5 326 30.4
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 2.0e-30 137.5 300 35.0
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 4.6e-30 136.3 236 36.0
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 4.6e-30 136.3 246 37.8
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 1.0e-29 135.2 314 34.7
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 5.0e-29 132.9 333 30.0
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 8.6e-29 132.1 326 31.0
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.9e-28 131.0 324 29.9
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 3.3e-28 130.2 232 38.4
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 3.3e-28 130.2 258 36.0
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 5.6e-28 129.4 332 30.4
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 6.2e-27 125.9 333 29.7
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 8.1e-27 125.6 367 31.6
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 1.4e-26 124.8 329 31.9
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 1.8e-26 124.4 326 30.1
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 1.5e-25 121.3 325 29.5
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 1.5e-25 121.3 326 30.1
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 1.5e-25 121.3 388 28.6
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 2.6e-25 120.6 332 30.1
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 7.5e-25 119.0 348 31.0
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 1.3e-24 118.2 168 42.9
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 4.9e-24 116.3 325 27.4
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 6.4e-24 115.9 201 36.8
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.9e-23 114.4 159 44.0
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 1.9e-23 114.4 245 35.5
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 5.4e-23 112.8 283 34.3
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 9.2e-23 112.1 163 39.9
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 9.2e-23 112.1 207 34.3
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 2.7e-22 110.5 339 31.6
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 2.7e-22 110.5 276 32.6
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 2.5e-20 104.0 198 37.4
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 9.5e-20 102.1 221 32.6
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 9.5e-20 102.1 320 31.6
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 1.2e-19 101.7 341 30.5
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 2.3e-18 97.4 235 35.3
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 6.8e-18 95.9 92 48.9
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 9.9e-17 92.0 155 36.8
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.3e-16 91.7 164 36.0
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 1.4e-15 88.2 211 33.6
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 5.4e-15 86.3 268 29.5
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 1.0e-13 82.0 217 28.1
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 1.3e-13 81.6 167 35.3
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 6.6e-13 79.3 277 29.2
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 2.5e-12 77.4 180 28.9
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 4.3e-12 76.6 296 28.4
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 5.6e-12 76.3 86 44.2
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 1.2e-11 75.1 103 42.7
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 1.6e-11 74.7 287 28.2
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 1.6e-11 74.7 93 37.6
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 3.6e-11 73.6 138 39.1
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 3.6e-11 73.6 286 27.3
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 8.9e-10 68.9 185 27.6


User provided reference genes

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