Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 9.8e-45 183.0 84 100.0
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 4.3e-24 114.4 51 94.1
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 5.6e-24 114.0 68 70.6
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 5.6e-24 114.0 51 92.2
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 7.3e-24 113.6 56 83.9
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 7.3e-24 113.6 54 88.9
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 7.3e-24 113.6 53 94.3
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 7.3e-24 113.6 51 92.2
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 7.3e-24 113.6 51 92.2
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 7.3e-24 113.6 51 92.2
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 7.3e-24 113.6 51 94.1
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 7.3e-24 113.6 51 94.1
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 7.3e-24 113.6 51 94.1
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 9.5e-24 113.2 51 92.2
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 9.5e-24 113.2 51 92.2
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 9.5e-24 113.2 51 92.2
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 1.6e-23 112.5 51 92.2
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 2.1e-23 112.1 51 92.2
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 2.1e-23 112.1 52 88.5
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 2.1e-23 112.1 51 90.2
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 2.1e-23 112.1 51 90.2
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 2.1e-23 112.1 51 90.2
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 2.1e-23 112.1 63 77.8
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 3.6e-23 111.3 51 90.2
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 3.6e-23 111.3 51 92.2
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 3.6e-23 111.3 51 90.2
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 3.6e-23 111.3 51 92.2
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 3.6e-23 111.3 51 92.2
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 3.6e-23 111.3 51 90.2
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 3.6e-23 111.3 51 90.2
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 4.7e-23 110.9 51 90.2
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 4.7e-23 110.9 51 92.2
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 6.2e-23 110.5 51 90.2
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 6.2e-23 110.5 51 90.2
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 6.2e-23 110.5 51 90.2
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 6.2e-23 110.5 51 90.2
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 8.1e-23 110.2 51 92.2
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 8.1e-23 110.2 51 90.2
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 8.1e-23 110.2 51 88.2
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 1.1e-22 109.8 51 92.2
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 1.1e-22 109.8 51 88.2
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 1.4e-22 109.4 51 88.2
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 1.4e-22 109.4 51 90.2
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 1.8e-22 109.0 51 86.3
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 1.8e-22 109.0 51 90.2
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 1.8e-22 109.0 51 88.2
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 1.8e-22 109.0 51 88.2
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 1.8e-22 109.0 51 88.2
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 2.3e-22 108.6 51 88.2
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 2.3e-22 108.6 51 88.2
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 2.3e-22 108.6 51 88.2
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 2.3e-22 108.6 51 88.2
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 2.3e-22 108.6 51 88.2
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 2.3e-22 108.6 51 90.2
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 3.1e-22 108.2 51 88.2
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 4.0e-22 107.8 51 88.2
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 4.0e-22 107.8 51 88.2
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 4.0e-22 107.8 51 88.2
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 4.0e-22 107.8 51 88.2
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 4.0e-22 107.8 51 88.2
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 4.0e-22 107.8 51 88.2
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 4.0e-22 107.8 51 88.2
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 4.0e-22 107.8 51 86.3
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 5.2e-22 107.5 51 88.2
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 5.2e-22 107.5 51 88.2
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 6.8e-22 107.1 51 90.2
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 6.8e-22 107.1 51 90.2
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 6.8e-22 107.1 51 88.2
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 8.9e-22 106.7 51 86.3
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 8.9e-22 106.7 51 86.3
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 1.2e-21 106.3 51 86.3
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 1.2e-21 106.3 51 86.3
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 1.2e-21 106.3 51 86.3
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 1.2e-21 106.3 51 86.3
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 1.2e-21 106.3 50 88.0
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 1.2e-21 106.3 51 86.3
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 1.2e-21 106.3 51 84.3
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 2.0e-21 105.5 50 86.0
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 2.0e-21 105.5 51 86.3
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 3.4e-21 104.8 51 88.2
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 3.4e-21 104.8 51 84.3
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 5.8e-21 104.0 51 82.4
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 2.2e-20 102.1 51 82.4
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 2.2e-20 102.1 51 82.4
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 4.1e-19 97.8 51 82.4
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 4.1e-19 97.8 51 78.4
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 7.1e-19 97.1 49 79.6
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 6.0e-18 94.0 51 74.5
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 1.7e-17 92.4 51 76.5
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 8.6e-17 90.1 51 72.5
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 2.5e-16 88.6 51 70.6
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 8.1e-15 83.6 36 94.4
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 9.9e-13 76.6 34 88.2


User provided reference genes

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