Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 0.0e+00 1203.7 604 100.0
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 0.0e+00 1091.6 605 91.1
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 2.0e-296 1021.9 604 86.4
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 3.1e-294 1014.6 605 85.5
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 4.3e-219 765.0 605 64.1
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 6.1e-213 744.6 620 62.9
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 7.9e-205 717.6 599 63.1
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 1.4e-204 716.8 601 61.4
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 5.7e-203 711.4 555 65.2
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 9.7e-203 710.7 613 60.0
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 2.8e-202 709.1 599 61.3
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 3.7e-202 708.8 579 64.1
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 8.2e-202 707.6 613 60.2
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 1.2e-200 703.7 600 61.3
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 2.0e-200 703.0 620 60.2
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 3.4e-200 702.2 619 60.4
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 1.3e-199 700.3 606 60.9
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 1.3e-199 700.3 607 61.8
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 8.5e-199 697.6 609 60.1
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 7.2e-198 694.5 609 59.6
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 1.8e-196 689.9 615 59.0
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.6e-195 686.0 579 62.7
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.4e-195 685.3 579 62.7
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 9.7e-195 684.1 579 62.5
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 8.2e-194 681.0 606 59.7
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-193 679.9 579 62.7
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 5.3e-193 678.3 602 60.3
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 1.3e-191 673.7 609 56.3
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 3.8e-191 672.2 588 60.0
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.2e-190 667.9 610 59.0
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 3.6e-189 665.6 583 58.7
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 6.1e-189 664.8 611 55.8
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 8.0e-189 664.5 609 56.5
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 2.3e-188 662.9 610 57.9
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 5.2e-188 661.8 607 59.8
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.2e-187 660.6 569 62.0
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 1.5e-187 660.2 602 57.0
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 5.7e-187 658.3 601 58.6
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 9.7e-187 657.5 578 59.9
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 1.7e-186 656.8 593 58.9
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.7e-186 656.8 606 58.9
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 2.8e-186 656.0 491 67.4
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 5.3e-185 651.7 618 57.1
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 1.6e-184 650.2 604 56.1
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 5.9e-184 648.3 620 56.6
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 1.7e-183 646.7 606 56.1
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 2.9e-183 646.0 628 55.9
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 6.5e-183 644.8 604 58.1
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 1.5e-182 643.7 598 55.5
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 1.9e-182 643.3 597 57.0
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 4.2e-182 642.1 595 56.1
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 5.5e-182 641.7 611 56.1
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 5.5e-182 641.7 608 56.2
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 7.2e-182 641.3 612 56.7
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 7.2e-182 641.3 612 57.4
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 9.4e-182 641.0 612 56.7
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 9.4e-182 641.0 524 62.4
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 1.2e-181 640.6 590 54.9
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 2.7e-181 639.4 500 64.4
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 3.6e-181 639.0 617 55.3
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 6.1e-181 638.3 610 55.9
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 5.2e-180 635.2 582 56.7
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 2.6e-179 632.9 638 54.4
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 2.4e-177 626.3 608 56.7
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.4e-177 626.3 556 59.4
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 5.4e-177 625.2 621 54.3
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 4.5e-176 622.1 576 57.1
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 5.9e-176 621.7 588 56.6
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 5.9e-176 621.7 607 56.5
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 1.3e-175 620.5 611 56.0
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 3.8e-175 619.0 613 55.8
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 2.8e-173 612.8 569 56.8
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 8.0e-173 611.3 600 55.8
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 3.0e-172 609.4 625 53.4
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 4.4e-171 605.5 673 50.4
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.2e-168 597.4 610 54.1
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 1.6e-168 597.0 649 50.2
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 7.8e-168 594.7 516 59.5
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 9.5e-166 587.8 611 52.5
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 1.4e-164 583.9 580 53.1
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-164 583.6 594 55.1
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 3.2e-161 572.8 474 63.5
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 3.0e-159 566.2 506 59.1
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 5.0e-159 565.5 489 61.6
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 5.6e-158 562.0 598 52.3
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 3.4e-155 552.7 584 51.5
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 1.7e-154 550.4 508 56.7
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 4.6e-152 542.3 559 55.6
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 2.4e-145 520.0 472 55.1
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 9.2e-145 518.1 573 49.0
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.6e-144 517.3 446 59.4
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 7.8e-144 515.0 489 53.6
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 1.1e-140 504.6 440 60.0
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 1.4e-140 504.2 448 56.9
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 1.4e-140 504.2 429 58.5
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 5.2e-140 502.3 454 58.1
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 4.4e-131 472.6 591 47.0
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 6.0e-128 462.2 640 42.8
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 1.5e-123 447.6 348 64.4
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 2.9e-122 443.4 585 42.6
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 3.5e-120 436.4 647 40.8
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 6.7e-111 405.6 332 63.3
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 3.7e-109 399.8 366 58.7
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 5.3e-100 369.4 474 47.7
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 7.2e-97 359.0 391 48.1
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 3.7e-93 346.7 461 41.0
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 1.4e-87 328.2 292 57.2
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 3.0e-87 327.0 332 56.0
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 7.2e-65 252.7 195 59.5
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 2.1e-64 251.1 403 37.2
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 1.4e-63 248.4 333 42.0
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 8.3e-61 239.2 183 62.8
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-57 228.0 156 69.2
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-57 228.0 156 69.2
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-57 228.0 156 69.2
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-57 228.0 156 69.2
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 1.2e-56 225.3 155 65.8
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 1.5e-54 218.4 256 50.0
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 2.9e-50 204.1 225 54.2
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 1.6e-48 198.4 222 47.3
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 1.6e-48 198.4 231 50.2
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 2.1e-48 198.0 183 55.7
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 5.6e-41 173.3 116 63.8
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 2.9e-37 161.0 515 28.3
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 2.3e-34 151.4 98 69.4
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 9.5e-33 146.0 361 28.8
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 6.2e-32 143.3 140 47.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.7e-29 134.0 238 37.4
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 1.2e-27 129.0 229 34.5
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 1.2e-27 129.0 132 48.5
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-26 125.6 156 46.8
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 3.9e-26 124.0 85 65.9
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 1.5e-25 122.1 149 54.4
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 8.1e-24 116.3 171 35.7
Sabra17G0121500 Salix brachista HOM05D002465 ORTHO05D005308 7.8e-19 99.8 136 44.1
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 2.5e-17 94.7 117 43.6
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 4.3e-17 94.0 150 36.0
Nitab4.5_0007593g0030 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.4e-15 89.0 45 84.4
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 2.0e-14 85.1 53 75.5
Rhsim10G0052100 Rhododendron simsii HOM05D002465 ORTHO05D036401 2.4e-12 78.2 91 56.0
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 2.7e-11 74.7 155 35.5
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 2.5e-09 68.2 77 40.3
CBR_g47978 Chara braunii HOM05D002465 ORTHO05D005308 5.3e-07 60.5 126 28.6
Solyc12g044350.1 Solanum lycopersicum HOM05D002465 ORTHO05D005308 3.4e-06 57.8 76 44.7
Peaxi162Scf00023g00818 Petunia axillaris HOM05D002465 ORTHO05D005308 4.5e-06 57.4 64 43.8


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