Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 6.2e-140 500.7 245 100.0
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 2.7e-135 485.3 245 96.7
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 5.8e-130 467.6 244 93.0
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 7.1e-112 407.5 245 82.0
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 7.6e-106 387.5 245 78.8
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 6.0e-103 377.9 245 78.0
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.9e-103 377.5 245 75.1
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 1.3e-102 376.7 247 76.5
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.3e-102 376.7 245 75.5
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 5.1e-102 374.8 245 74.7
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 8.7e-102 374.0 248 75.0
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.5e-101 373.2 245 74.3
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 5.7e-101 371.3 245 75.9
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 7.4e-101 370.9 246 74.8
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 9.6e-101 370.5 239 77.0
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 1.3e-100 370.2 245 75.9
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.3e-100 370.2 245 73.9
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 1.6e-100 369.8 238 75.2
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.6e-100 369.8 239 78.2
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 2.1e-100 369.4 245 74.7
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.1e-100 369.4 245 75.9
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.8e-100 368.2 245 73.9
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.3e-100 367.9 245 73.5
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.2e-100 367.5 249 73.1
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.1e-99 367.1 246 74.4
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.1e-99 365.2 249 72.7
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.5e-98 363.2 245 73.5
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.5e-98 363.2 241 73.9
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 5.9e-98 361.3 239 73.6
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.3e-97 360.1 233 73.4
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.3e-97 360.1 243 73.3
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 8.5e-97 357.5 252 71.4
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 8.5e-97 357.5 244 71.7
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.4e-96 356.7 239 74.9
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.4e-96 356.7 235 73.2
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.9e-96 356.3 233 72.1
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.5e-96 355.9 239 72.4
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 4.2e-96 355.1 242 73.1
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 9.3e-96 354.0 245 71.8
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 1.2e-95 353.6 238 72.3
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.2e-95 353.6 238 72.3
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.6e-95 352.1 235 73.2
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 3.6e-95 352.1 238 71.8
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 3.6e-95 352.1 228 74.1
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 4.6e-95 351.7 248 71.8
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 6.1e-95 351.3 239 72.8
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 7.9e-95 350.9 240 71.7
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.8e-94 349.7 248 71.8
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.3e-94 349.4 247 70.0
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 2.3e-94 349.4 228 74.1
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 3.9e-94 348.6 222 74.8
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 8.7e-94 347.4 217 77.4
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.7e-94 347.4 247 69.6
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 4.3e-93 345.1 236 72.0
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 7.4e-93 344.4 237 70.9
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 1.3e-92 343.6 239 69.9
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 1.6e-92 343.2 238 71.4
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 2.2e-92 342.8 245 69.8
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 4.8e-92 341.7 248 69.4
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 6.3e-92 341.3 247 68.4
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 6.3e-92 341.3 240 70.8
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.1e-91 340.5 242 70.2
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.4e-91 340.1 232 72.4
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.8e-91 339.7 222 73.9
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.8e-91 339.7 235 73.6
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 4.1e-91 338.6 217 75.6
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 4.1e-91 338.6 220 73.2
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.5e-90 336.7 235 70.6
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 2.6e-90 335.9 307 59.6
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 2.2e-89 332.8 236 71.2
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 2.9e-89 332.4 252 66.3
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 3.2e-88 328.9 241 67.6
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 5.5e-88 328.2 236 67.8
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 1.2e-87 327.0 244 67.6
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 4.6e-87 325.1 239 66.5
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 1.4e-86 323.6 230 69.1
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 3.0e-86 322.4 195 77.9
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.1e-85 320.5 249 67.5
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 2.6e-85 319.3 207 74.4
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 5.7e-85 318.2 243 66.3
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.3e-84 317.0 222 70.7
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 1.7e-84 316.6 229 64.6
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 3.7e-84 315.5 239 66.5
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 4.8e-84 315.1 199 75.9
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 6.3e-84 314.7 195 77.4
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.8e-83 313.2 222 70.7
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 2.4e-83 312.8 195 76.9
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 4.1e-83 312.0 221 71.0
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.2e-82 310.5 211 72.0
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 1.2e-82 310.5 232 66.4
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.2e-82 310.5 232 66.4
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.2e-82 310.5 232 66.4
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 5.9e-82 308.1 222 69.4
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 5.9e-82 308.1 234 66.2
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 7.7e-82 307.8 234 65.8
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 7.7e-82 307.8 234 65.8
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 2.9e-81 305.8 231 64.1
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 8.5e-81 304.3 206 73.3
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 1.2e-79 300.4 217 66.4
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 6.1e-79 298.1 243 61.3
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 1.1e-77 293.9 187 74.3
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 2.6e-74 282.7 199 71.4
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.9e-72 276.6 213 62.9
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 5.5e-72 275.0 239 58.6
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 8.2e-68 261.2 212 62.7
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 3.1e-67 259.2 189 66.7
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 2.0e-66 256.5 209 64.6
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.5e-64 249.6 261 55.2
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 7.2e-64 248.1 218 57.3
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 1.4e-62 243.8 221 54.3
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.4e-59 233.8 142 76.1
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 4.1e-59 232.3 238 52.1
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 2.7e-58 229.6 222 54.1
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 5.0e-57 225.3 183 60.7
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 1.9e-56 223.4 141 77.3
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.2e-53 214.2 192 57.3
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 7.8e-50 201.4 128 75.8
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 1.2e-31 141.0 184 43.5
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.6e-29 133.3 110 61.8
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 5.4e-27 125.6 208 38.0
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.2e-23 114.4 254 31.1
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 2.6e-21 106.7 167 38.9
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 1.1e-19 101.3 184 38.0
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 7.3e-16 88.6 50 78.0
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 4.0e-14 82.8 49 77.6
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 2.6e-13 80.1 60 61.7
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 4.8e-07 59.3 34 73.5


User provided reference genes

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