Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 0.0e+00 1814.3 961 100.0
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 0.0e+00 1706.0 964 91.6
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 0.0e+00 1481.5 964 84.0
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 0.0e+00 1312.4 973 70.6
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 2.2e-302 1042.3 1033 56.7
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 1.6e-300 1036.2 1025 54.8
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 7.4e-298 1027.3 951 57.1
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 4.8e-297 1024.6 1060 54.9
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 6.5e-294 1014.2 1004 55.8
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 2.1e-292 1009.2 967 57.0
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 4.7e-292 1008.1 1039 55.0
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 6.1e-292 1007.7 1025 53.8
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 1.8e-291 1006.1 977 55.9
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 1.5e-290 1003.0 928 58.6
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 2.6e-290 1002.3 994 55.5
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 3.4e-290 1001.9 921 57.3
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 9.7e-290 1000.3 965 58.1
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 4.1e-288 995.0 989 54.6
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 7.7e-287 990.7 984 55.2
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 7.7e-287 990.7 971 56.2
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 1.0e-286 990.3 971 56.2
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 2.2e-286 989.2 1053 52.6
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 3.8e-286 988.4 1058 54.4
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 5.5e-285 984.6 1015 54.1
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 1.2e-284 983.4 948 55.9
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 4.7e-284 981.5 1041 52.5
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 4.0e-283 978.4 1014 53.3
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 4.4e-282 974.9 1027 53.8
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 1.4e-280 969.9 1045 53.1
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 2.0e-279 966.1 1057 51.4
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 4.5e-279 964.9 1001 52.2
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 4.5e-279 964.9 979 53.3
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 1.3e-278 963.4 1040 53.6
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 1.3e-278 963.4 967 53.7
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 3.3e-277 958.7 1043 51.7
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 3.6e-276 955.3 981 53.0
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 4.7e-276 954.9 974 52.9
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 5.7e-274 948.0 956 54.3
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.7e-273 945.3 1051 50.7
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 6.3e-273 944.5 1051 50.6
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 1.1e-272 943.7 982 53.5
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 2.7e-271 939.1 1051 50.5
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 4.5e-271 938.3 1052 50.0
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 1.0e-270 937.2 998 51.6
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 2.9e-270 935.6 964 52.9
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.3e-269 932.2 977 52.0
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 3.6e-268 928.7 1010 52.2
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 6.8e-267 924.5 993 51.9
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 1.2e-266 923.7 978 52.2
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 3.4e-266 922.2 925 53.7
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 3.7e-265 918.7 986 53.5
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 3.5e-263 912.1 965 53.2
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 1.4e-259 900.2 1019 51.7
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 5.2e-259 898.3 901 53.4
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 6.8e-259 897.9 956 54.1
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 2.0e-258 896.3 901 53.4
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 2.0e-258 896.3 955 51.9
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 3.4e-258 895.6 996 51.7
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 5.8e-258 894.8 956 52.3
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 1.3e-257 893.6 943 53.2
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.2e-257 892.9 972 51.2
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 3.5e-255 885.6 1005 50.6
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 6.0e-255 884.8 840 55.4
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 1.9e-253 879.8 947 52.0
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 4.4e-250 868.6 985 49.7
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 4.4e-250 868.6 974 51.5
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 1.7e-249 866.7 820 54.9
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 4.9e-249 865.1 965 50.9
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 6.4e-249 864.8 932 53.0
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 1.1e-248 864.0 982 49.5
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 5.4e-248 861.7 1009 49.2
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 9.6e-245 850.9 1044 48.5
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 5.1e-238 828.6 841 52.0
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 2.8e-236 822.8 856 53.3
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 2.5e-229 799.7 843 50.7
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 5.4e-224 781.9 1033 43.7
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 5.4e-224 781.9 1033 43.7
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 5.4e-224 781.9 1052 43.7
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 6.0e-223 778.5 971 45.0
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 6.0e-223 778.5 956 48.6
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 3.0e-222 776.2 1037 43.5
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 3.9e-222 775.8 870 50.8
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 1.9e-221 773.5 971 45.7
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 2.5e-221 773.1 971 45.3
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 4.3e-221 772.3 971 45.6
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 7.4e-221 771.5 980 45.1
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.7e-220 769.2 746 53.4
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 1.1e-219 767.7 1030 44.2
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 3.4e-218 762.7 979 44.1
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 4.5e-218 762.3 816 49.4
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 7.1e-216 755.0 967 44.2
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 2.3e-214 750.0 1035 42.9
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 5.7e-213 745.3 966 43.8
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 2.8e-212 743.0 1037 42.3
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 4.8e-212 742.3 907 48.1
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 3.1e-211 739.6 683 55.3
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 5.7e-205 718.8 971 43.9
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 9.4e-200 701.4 966 42.3
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 1.0e-198 698.0 777 49.4
Cc02_g03640 Coffea canephora HOM05D005963 ORTHO05D006869 6.5e-193 678.7 564 58.5
Gohir.D07G044301 Gossypium hirsutum HOM05D005963 ORTHO05D006869 2.0e-189 667.2 556 59.0
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 3.3e-189 666.4 562 57.5
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 5.2e-182 642.5 600 52.0
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 2.7e-170 603.6 622 51.3
Atru.chr1.580 Acer truncatum HOM05D005963 ORTHO05D006869 3.3e-128 463.8 396 57.6
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 7.3e-128 462.6 479 48.4
Aa31LG3G8240 Aethionema arabicum HOM05D005963 ORTHO05D006869 4.5e-117 426.8 407 51.6
C09p41240 Brassica napus HOM05D005963 ORTHO05D006869 4.5e-117 426.8 725 39.2
Glyma.16G201100 Glycine max HOM05D005963 ORTHO05D006869 2.5e-91 341.3 438 50.2
ATR0661G452 Amborella trichopoda HOM05D005963 ORTHO05D006869 2.5e-75 288.1 469 41.6
Atru.chr1.581 Acer truncatum HOM05D005963 ORTHO05D006869 1.9e-67 261.9 392 45.4
PGSC0003DMG400007558 Solanum tuberosum HOM05D005963 ORTHO05D006869 4.7e-58 230.7 328 38.7
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 2.0e-48 198.7 738 27.2
MBI05_g12587_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 9.8e-48 196.4 159 54.1
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 3.5e-45 188.0 239 49.0
Pp3c2_90 Physcomitrium patens HOM05D005963 ORTHO05D006869 2.1e-42 178.7 387 30.7
Pp3c26_6160 Physcomitrium patens HOM05D005963 ORTHO05D006869 8.0e-42 176.8 387 31.0
Pp3c26_6250 Physcomitrium patens HOM05D005963 ORTHO05D006869 8.0e-42 176.8 387 31.0
Pp3c18_1570 Physcomitrium patens HOM05D005963 ORTHO05D006869 3.4e-40 171.4 387 30.7
MBI05_g12586_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 2.0e-37 162.2 198 47.0
SMO174G0009 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.2e-31 142.1 408 27.0
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.2e-31 142.1 324 29.9
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 1.9e-30 139.0 409 29.8
SMO195G0003 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 1.5e-19 102.8 394 25.9
SMO116G0123 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.3e-17 95.5 311 26.0
MBI05_g12588_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 4.1e-14 84.7 65 64.6
SMO268G0015 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 6.0e-13 80.9 175 30.9
CDE08G0941 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 2.5e-11 75.5 102 47.1
CBR_g38396 Chara braunii HOM05D002537 ORTHO05D002751 2.8e-10 72.0 132 32.6
AagrBONN_evm.TU.Sc2ySwM_117.2839 Anthoceros agrestis HOM05D002537 ORTHO05D006869 2.9e-07 62.0 132 28.0
CSS0009758 Camellia sinensis var. sinensis HOM05D002537 ORTHO05D002751 4.9e-07 61.2 151 30.5
SMO351G0173 Selaginella moellendorffii HOM05D002537 ORTHO05D002751 8.4e-07 60.5 85 37.6
CAN.G675.10 Capsicum annuum HOM05D003725 ORTHO05D004294 1.1e-06 60.1 144 31.9
Eucgr.D01036 Eucalyptus grandis HOM05D003725 ORTHO05D004294 1.1e-06 60.1 132 31.1
Sopen02g018540 Solanum pennellii HOM05D003725 ORTHO05D004294 1.4e-06 59.7 135 29.6
Cre02.g095117 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.9e-06 59.3 161 27.3
DCAR_000127 Daucus carota HOM05D002537 ORTHO05D002751 1.9e-06 59.3 123 31.7
DCAR_024631 Daucus carota HOM05D002537 ORTHO05D002751 1.9e-06 59.3 123 31.7
Nitab4.5_0007658g0010 Nicotiana tabacum HOM05D002537 ORTHO05D002751 2.4e-06 58.9 130 31.5
Zm00001eb421380 Zea mays HOM05D002537 ORTHO05D002751 2.4e-06 58.9 123 32.5
RcHm_v2.0_Chr4g0428941 Rosa chinensis HOM05D002537 ORTHO05D002751 3.2e-06 58.5 150 28.7
Pp3c19_13320 Physcomitrium patens HOM05D003725 ORTHO05D004294 5.4e-06 57.8 196 25.5
Solyc02g069390.2 Solanum lycopersicum HOM05D003725 ORTHO05D004294 5.4e-06 57.8 119 32.8
Mapoly0001s0312 Marchantia polymorpha HOM05D029505 ORTHO05D006869 7.1e-06 57.4 148 27.7
Zm00001eb084860 Zea mays HOM05D002537 ORTHO05D002751 7.1e-06 57.4 123 28.5
Aqoxy1G00445 Aquilegia oxysepala HOM05D002537 ORTHO05D002751 9.3e-06 57.0 126 29.4
CBR_g29752 Chara braunii HOM05D000601 ORTHO05D000407 9.3e-06 57.0 95 34.7
Mapoly0065s0047 Marchantia polymorpha HOM05D003725 ORTHO05D004294 9.3e-06 57.0 156 28.8
Oeu063117.1 Olea europaea HOM05D003725 ORTHO05D004294 9.3e-06 57.0 126 31.7
Pp3c12_22800 Physcomitrium patens HOM05D002537 ORTHO05D002751 9.3e-06 57.0 136 25.0
Sabra01G0046500 Salix brachista HOM05D002537 ORTHO05D002751 9.3e-06 57.0 124 31.5
Sed0027950 Sechium edule HOM05D002537 ORTHO05D002751 9.3e-06 57.0 129 31.8


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