Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G014760 Cucumis sativus L. HOM05D003565 ORTHO05D003943 3.1e-72 275.0 137 100.0
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 1.0e-27 127.1 121 53.7
CsaV3_3G014750 Cucumis sativus L. HOM05D003565 ORTHO05D003943 1.2e-23 113.6 121 51.2
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 1.7e-17 93.2 114 47.4
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 1.1e-13 80.5 104 43.3
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 1.1e-13 80.5 113 41.6
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 1.5e-13 80.1 108 44.4
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 1.9e-13 79.7 101 44.6
Sed0004032 Sechium edule HOM05D003565 ORTHO05D003943 3.2e-13 79.0 111 39.6
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 5.5e-13 78.2 105 41.9
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.2e-12 77.0 104 40.4
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.2e-12 77.0 111 39.6
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 1.6e-12 76.6 101 40.6
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.6e-12 76.6 111 39.6
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 1.6e-12 76.6 101 42.6
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 1.6e-12 76.6 116 38.8
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 2.1e-12 76.3 122 36.1
CANSAT78G1552 Cannabis sativa HOM05D003565 ORTHO05D003943 2.7e-12 75.9 102 44.1
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 2.7e-12 75.9 113 38.9
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 4.7e-12 75.1 105 39.0
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 8.0e-12 74.3 105 41.9
Ciclev10006409m.g Citrus clementina HOM05D003565 ORTHO05D003943 8.0e-12 74.3 92 41.3
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 8.0e-12 74.3 111 38.7
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 8.0e-12 74.3 111 41.4
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 8.0e-12 74.3 129 34.9
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 1.0e-11 73.9 108 41.7
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 1.0e-11 73.9 110 37.3
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 1.8e-11 73.2 109 39.4
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 2.3e-11 72.8 105 40.0
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 3.0e-11 72.4 120 33.3
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 3.0e-11 72.4 111 39.6
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 3.0e-11 72.4 120 35.8
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 4.0e-11 72.0 108 37.0
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 4.0e-11 72.0 111 38.7
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 4.0e-11 72.0 106 41.5
TAR362G0267 Trochodendron aralioides HOM05D003565 ORTHO05D003943 4.0e-11 72.0 108 38.0
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 6.8e-11 71.2 111 39.6
TWI09G1223 Tripterygium wilfordii HOM05D003565 ORTHO05D003943 6.8e-11 71.2 104 41.3
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 8.8e-11 70.9 109 35.8
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 8.8e-11 70.9 106 39.6
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 8.8e-11 70.9 110 36.4
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 1.2e-10 70.5 127 37.8
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 1.2e-10 70.5 105 38.1
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 1.5e-10 70.1 96 38.5
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 2.0e-10 69.7 108 39.8
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.0e-10 69.7 98 38.8
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.0e-10 69.7 98 38.8
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 3.4e-10 68.9 114 36.0
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 4.4e-10 68.6 127 37.0
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 7.5e-10 67.8 129 34.9
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 2.2e-09 66.2 129 34.9
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 2.8e-09 65.9 118 34.7
CsaV3_3G014770 Cucumis sativus L. HOM05D003565 ORTHO05D003943 3.7e-09 65.5 121 36.4
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 4.8e-09 65.1 99 37.4
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 8.3e-09 64.3 129 32.6
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 1.1e-08 63.9 131 32.1
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 1.1e-08 63.9 107 38.3
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 1.4e-08 63.5 109 37.6
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.8e-08 63.2 97 38.1
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 3.1e-08 62.4 109 37.6
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 3.1e-08 62.4 127 33.1
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 4.1e-08 62.0 107 37.4
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 4.1e-08 62.0 104 39.4
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 1.2e-07 60.5 102 38.2
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 1.2e-07 60.5 105 35.2
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.2e-07 60.5 116 34.5
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 2.7e-07 59.3 99 40.4
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 2.7e-07 59.3 126 34.1
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 3.5e-07 58.9 109 35.8
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 3.5e-07 58.9 110 34.5
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 3.5e-07 58.9 114 36.0
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.9e-07 58.2 97 36.1
CiPaw.02G059300 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.9e-07 58.2 99 34.3
Ciclev10006885m.g Citrus clementina HOM05D003565 ORTHO05D003943 5.9e-07 58.2 135 32.6
CSS0017850 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 7.7e-07 57.8 105 36.2
CARHR091910 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.0e-06 57.4 97 38.1
CsaV3_UNG044240 Cucumis sativus L. HOM05D003565 ORTHO05D003943 2.3e-06 56.2 95 37.9
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 3.8e-06 55.5 106 31.1
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 3.8e-06 55.5 109 29.4
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 5.0e-06 55.1 116 33.6
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 5.0e-06 55.1 104 32.7
Thhalv10021522m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 6.6e-06 54.7 97 37.1
ATR0796G036 Amborella trichopoda HOM05D003565 ORTHO05D003943 8.6e-06 54.3 108 33.3
A01p37210 Brassica napus HOM05D003565 ORTHO05D003943 8.6e-06 54.3 111 31.5
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 8.6e-06 54.3 106 39.6


User provided reference genes

Program Settings