Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 4.2e-38 161.8 151 100.0
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 3.3e-35 152.1 151 97.4
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 1.4e-33 146.7 151 94.7
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 4.1e-17 92.0 144 79.2
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 9.4e-14 80.9 142 76.1
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 1.7e-10 70.1 153 69.9
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 2.2e-10 69.7 153 63.4
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 2.8e-10 69.3 135 77.8
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 6.3e-10 68.2 128 71.9
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 1.1e-09 67.4 143 37.8
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 1.8e-09 66.6 49 75.5
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.4e-09 66.2 49 75.5
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 2.4e-09 66.2 135 65.9
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 2.4e-09 66.2 133 75.2
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 4.1e-09 65.5 129 61.2
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.3e-09 65.1 150 63.3
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 7.0e-09 64.7 141 62.4
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 7.0e-09 64.7 151 60.3
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 7.0e-09 64.7 122 76.2
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.2e-08 63.9 151 63.6
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 1.2e-08 63.9 133 66.9
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 1.2e-08 63.9 133 69.9
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 1.6e-08 63.5 153 62.1
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.0e-08 63.2 144 58.3
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.0e-08 63.2 144 58.3
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 2.0e-08 63.2 46 69.6
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 2.0e-08 63.2 130 70.0
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 4.5e-08 62.0 153 58.8
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 4.5e-08 62.0 145 69.0
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 5.9e-08 61.6 150 62.7
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 5.9e-08 61.6 147 66.0
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.3e-07 60.5 119 64.7
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 2.2e-07 59.7 153 55.6
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 2.2e-07 59.7 36 80.6
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 2.2e-07 59.7 137 62.8
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 2.2e-07 59.7 137 62.8
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.9e-07 59.3 150 62.0
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 2.9e-07 59.3 117 71.8
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 2.9e-07 59.3 143 69.9
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 3.8e-07 58.9 152 65.8
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 5.0e-07 58.5 152 67.1
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 6.5e-07 58.2 47 72.3
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 6.5e-07 58.2 45 68.9
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 6.5e-07 58.2 143 64.3
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 8.5e-07 57.8 49 69.4
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 8.5e-07 57.8 48 68.8
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 8.5e-07 57.8 48 68.8
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 1.1e-06 57.4 44 72.7
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 1.1e-06 57.4 148 62.2
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.1e-06 57.4 140 67.1
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.5e-06 57.0 140 69.3
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.5e-06 57.0 148 54.7
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 1.5e-06 57.0 140 57.1
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 1.9e-06 56.6 38 78.9
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 1.9e-06 56.6 145 70.3
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 2.5e-06 56.2 46 67.4
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 2.5e-06 56.2 45 66.7
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 2.5e-06 56.2 116 75.9
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 3.2e-06 55.8 54 63.0
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 3.2e-06 55.8 143 60.8
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 4.2e-06 55.5 156 60.3
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 4.2e-06 55.5 121 79.3
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 5.5e-06 55.1 114 69.3
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 9.4e-06 54.3 139 66.2


User provided reference genes

Program Settings